Xanthomonas oryzae pv. oryzicola BLS256: XOC_3356
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Entry
XOC_3356 CDS
T01873
Symbol
ruvB
Name
(GenBank) holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XOC_3356 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_3356 (ruvB)
Enzymes [BR:
xor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XOC_3356 (ruvB)
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XOC_3356 (ruvB)
RecFOR pathway proteins
XOC_3356 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
Mg_chelatase
AAA_16
AAA_22
TIP49
nSTAND3
AAA_14
Bac_DnaA
AAA_33
TsaE
AAA_2
NB-ARC
NTPase_1
Rad17
RNA_helicase
AAA_18
TniB
DUF815
AAA_17
AAA_28
Sigma54_activ_2
AAA_24
ABC_tran
ATPase_2
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AEQ97450
UniProt:
G7TCT3
LinkDB
All DBs
Position
complement(3442348..3443385)
Genome browser
AA seq
345 aa
AA seq
DB search
MDQRIIASSSTREDDAADASIRPKRLADYLGQQPVREQMEIYIQAAKARGEAMDHVLIFG
PPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVV
EEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLE
FYSPQELTRIVIRSAAILGIDCTPEGAAEIARRARGTPRIANRLLRRVRDYAQVKAAGHI
DLPVAQAAMQMLKVDPEGFDELDRRMLRTIVEHFDGGPVGVESLAASLSEERGTLEDVIE
PYLIQQGFLIRTARGRMVTTKAYLHLGLKPPRDRAPGIGEPGDLF
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaccagcgcatcatcgccagcagctccacccgcgaagacgatgccgccgatgcgagc
attcgtcccaagcgcttggccgattatctcggccagcagccggtgcgcgagcagatggag
atctacatccaggcggccaaggcgcgcggcgaggcgatggatcatgtgctgatcttcggc
ccgcccgggttgggcaagaccacgctcagccacgtcatcgccaacgagttgggcgtgagc
ctgcgcgtgacctccggcccggtgatcgaaaaggccggcgatctggccgcgctgctgacc
aacctgcagccgcacgatgtgttgttcatcgacgaaatccaccgcctctcgccggtggtg
gaagaagtgctgtacccggcgatggaagatttccagatcgacatcatgatcggcgacggc
ccggccgcgcgttcgatcaagatcgatctgccgccgttcaccctgatcggcgccaccacc
cgtgccgggttgctgaccgcgccactgcgcgaccgcttcggcatcgtgcagcggctggag
ttctattcgccgcaggagctgacccgcatcgtgatccgctcggcggcaattctgggcatc
gactgcacgcccgagggcgctgcggaaatcgcacgccgcgcgcgtggaaccccgcgtatc
gccaaccggctgttgcgccgcgtgcgcgactacgcccaggtcaaggcggccgggcatatc
gatttgccggtggcgcaggcggccatgcagatgctcaaggtcgatccggaagggttcgac
gagctcgaccgtcgcatgttgcgcaccatcgtcgagcatttcgatggcggcccagtcggt
gttgaatcgctcgccgcctcgctgtcggaagagcgcggcacgctggaagacgtgatcgaa
ccctatctgatccagcagggctttctgatccgcaccgcgcgcggccgcatggtcaccacc
aaggcctatctgcatctgggcctgaagccgccgcgcgaccgcgccccgggcatcggcgaa
ccgggagacttgttctga
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