Xanthomonas oryzae pv. oryzicola BLS256: XOC_3391
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Entry
XOC_3391 CDS
T01873
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00300
Lysine biosynthesis
xor00470
D-Amino acid metabolism
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01120
Microbial metabolism in diverse environments
xor01230
Biosynthesis of amino acids
Module
xor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XOC_3391
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XOC_3391
Enzymes [BR:
xor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XOC_3391
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
Motif
Other DBs
NCBI-ProteinID:
AEQ97485
UniProt:
G7TCW8
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All DBs
Position
3486440..3487636
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AA seq
398 aa
AA seq
DB search
MSLCIDTAAALAALPHVRDRCDGPICAYVYDLAALDAHAAWMRAQLPAQCELFYAAKANA
EPPILQTLAAHVDGFEAASGGELAWLHAQQPQAPLLFGGPGKLDTELAQAAALPDCTVHV
ESLSELERLAAIAAHAGRCVPVFLRMNIAVPGAQSTRLTMGGHPSPFGLDPDDLDAAMQL
LQASPSLRLEGFHFHLMSHQRDAAAQLQLIAAYLRTVQRWRHTYALGPLRVNAGGGFGVD
YLAPESSFDWAGFCAGLPALLGEHGTDLRLRLEPGRYVSASCGWYLMEVLDLKRSHGAWF
AIARGGTHHFRTPAAQAHDHPFRVLRGARTPVLRDTPVTLVGQLCTPKDVLARDQSVAAL
APGDCLAFPLAGAYAWTISHQHFLMHPAPQMVFLPAKK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgtgcatcgacaccgccgcggcgcttgcggccttgccgcacgtgcgcgaccgc
tgcgatggcccgatctgcgcatacgtctacgacctggcggcattggacgcacacgcggcc
tggatgcgcgcacagctgccggcgcagtgcgagctgttctatgcagcaaaagccaacgca
gaaccgccgattctgcaaacgctggcagcgcatgtggatggcttcgaagccgcatccggc
ggcgaactcgcctggctgcatgcgcagcaaccgcaggcaccgttgctgttcggtggcccg
ggcaaactcgataccgagctcgcccaggcagccgccctgcccgactgcacggtgcatgtg
gaaagcctgagcgaactcgaacgcctggcggcaattgccgcgcacgccggccgctgcgtg
ccggtgttcctgcgcatgaatatcgccgtacccggcgcgcagagcacacgcctgacgatg
ggcgggcatccctcgccgttcggtctggatccggacgatctggatgcagcgatgcagctg
ctgcaggcaagcccatcgctgcgcctggaaggcttccacttccatctgatgtcgcatcaa
cgcgatgccgctgcacaactgcagctgatcgccgcttacctgcgcaccgtgcagcggtgg
cggcatacctatgcgctgggcccattgcgggtcaatgccggcggcggcttcggggtggac
tatctggcgccggaatcgtcgttcgattgggccggcttctgtgccgggctaccggccctg
ctgggcgaacatggcacagacctgcgcctgcgcctggaaccgggccgctatgtcagcgcc
agctgcggctggtatctgatggaagtgctggatctcaaacgcagtcacggcgcctggttt
gcgatcgcacgtggcggcacccaccacttccgcaccccggccgcacaggcgcacgatcac
ccattccgtgtgttgcgtggggcacgtacgccggtgctgcgcgatacgccggtcaccctg
gtcgggcagttgtgcacacccaaggatgtgctggcacgtgatcaatccgtcgccgcgctg
gcaccgggtgattgcctggcttttccgctggccggcgcctatgcatggacaatttcgcac
cagcactttctgatgcatccggcaccgcagatggtgtttttgccagcgaagaagtga
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