Xanthomonas oryzae pv. oryzicola BLS256: XOC_3774
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Entry
XOC_3774 CDS
T01873
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XOC_3774
Enzymes [BR:
xor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XOC_3774
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AEQ97864
UniProt:
G7TGB7
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Position
3892421..3894022
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AA seq
533 aa
AA seq
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MPRHRLHTFACALLLYAGVSAPALAEFGFTRSGDRVIVDSGAELVFSVDTHNGDIVSMRY
CDNELQTTEPKGSHIASGLGSDSVDARIAGGTIVVSAKAGDLIQYYIARKGRNAIYMATY
APTLPPVGELRFVARLNVSKLPDAQQEPDSNVGTAIEGNDVFLLPDGRTSSKFYSARRMM
DDQVHGVSGPGVAVFMLMGNREHSAGGPFFKDIATQKTRVTHELYNYMYSDHTQTEAFRG
GLHGVYGLLFTDGSAPSDAQLNTDFVDATLGLSDYLPASGRGAVGGQVSGVLPDQPAVIG
LRNAQAQYWATADGSGEYQVTGVRPGRYRMTLYQNELEVAWRDIEVFANDTAHATLQAVA
LPGTLKWQIGIPDGTPAGFGYADLLPHAHPSDARMRWSAATYTVGSSGQSSVPAVQWRGI
NTPSRIDFTLAADEVRDYRLRIFVPLAQGSACPQISVNARWNGPMPDAPLQPKTRGITRG
TTRGNNALYEMDIPASALQAGSNCIEIGIASGSPDNGFLSPAIVFDSIQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtcatcgcctgcacaccttcgcctgcgcgctgttgctctatgccggcgtcagc
gcacctgcactggccgaattcgggttcacccgcagtggcgaccgcgtgattgtcgacagt
ggcgccgagctggtgttttcggtcgatacacacaatggcgatatcgtatcgatgcgctat
tgcgacaacgaactgcagaccaccgaaccgaagggttcgcacatcgcttcggggctgggc
agcgacagcgtggacgcacgcatcgcgggtggaacgatcgtcgtgtccgccaaggccggc
gatctgatccagtactacatcgcgcgcaagggccgcaacgcgatctacatggccacgtat
gcgccaaccttgccaccagtgggcgaattgcgcttcgtggcccgcttgaatgtgtccaag
ttgccggatgcgcagcaggaacccgattccaatgtcggcacagcgatcgaaggcaacgat
gtctttctgttgccggatgggcgcaccagttccaaattctattccgcacgccgaatgatg
gacgaccaggtgcatggcgtcagcggccccggcgttgcagtgttcatgctgatgggcaac
cgcgagcacagcgcgggcgggccgttcttcaaggacatcgccacgcaaaagactcgtgtg
acacatgaactctacaattacatgtattccgaccacacccagaccgaagcatttcgtggc
ggcctgcatggtgtgtacgggttgttgttcaccgatggcagcgcgccatccgatgcgcag
ctcaacaccgatttcgtcgatgccacgctgggtctgagcgattatttgccggcaagcggg
cgcggtgcagtcggcgggcaagtgagcggcgtgctgcccgaccagccggcagttatcggt
ctgcgcaacgcgcaggcgcaatactgggccaccgcggacgggagtggcgagtatcaggtg
acaggcgtgcgcccgggcagatatcgcatgacgctctaccagaacgaactggaagtcgca
tggcgcgatatcgaagtgtttgccaacgacacagcacacgccacacttcaggcggtcgcc
ttaccgggcacgctgaagtggcagatcggcattcccgatggcacgccggcggggttcgga
tacgcggacctgctaccgcatgcgcacccttccgatgcgcgcatgcgctggtctgcggcg
acgtacaccgtcgggtcgagcggccagagcagcgttcccgcggtgcagtggcgcggtatc
aacaccccgagccggatcgacttcaccctggccgccgacgaggtacgcgactatcgcctg
cgcatcttcgtgccgttggcgcagggcagtgcatgcccgcagatcagcgtgaatgcccgc
tggaatgggccgatgcctgacgcccctctgcagccgaagacacgcggcatcacgcgcggc
acgacgcgtggcaacaacgccctgtacgagatggacattcccgcctctgctttgcaggcc
ggcagtaactgcatcgagatcggcattgcctcaggctccccggacaacggcttcctcagc
ccggcaatcgtgtttgacagcatccaactggtggcgttgtag
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