Xanthomonas oryzae pv. oryzicola BLS256: XOC_3844
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Entry
XOC_3844 CDS
T01873
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00521
Streptomycin biosynthesis
xor00523
Polyketide sugar unit biosynthesis
xor00541
Biosynthesis of various nucleotide sugars
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01250
Biosynthesis of nucleotide sugars
Module
xor_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XOC_3844 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XOC_3844 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XOC_3844 (rfbC)
Enzymes [BR:
xor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
XOC_3844 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
AEQ97934
UniProt:
G7TGZ3
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All DBs
Position
complement(3979100..3979657)
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AA seq
185 aa
AA seq
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MKIVETRLPGCVVIEPAVFGDERGYFFETWNAERFGQHGLPTQFVQSNVSTSAKGVLRGL
HYQWPRPQGKLVSVLEGEVYDVAVDVRHGSPNFGQWAAVVLSAENNKQFWIPEGFAHGFA
VLSERAVFSYLCTDVYVKEADAGVRWDDAAIGIDWPISDPLLSAKDAAAPFLADVPAERL
PVYTP
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaatcgtcgaaacgcgtttaccaggttgtgtcgtcatcgagccggcagtgttcggc
gatgagcgcggatatttcttcgaaacgtggaatgccgagcgcttcgggcaacatggtctg
ccgacgcagttcgtgcagagcaatgtctccacctcggccaaaggcgtgttgcgtggtttg
cattaccagtggccgcgtcctcagggcaagctggtcagcgtgctggagggtgaggtctac
gacgtggcggtcgatgtccgccatggctcgcccaacttcgggcagtgggcggcagtggtg
ttgagcgcagaaaacaacaagcagttctggataccggaagggtttgcgcacggctttgcg
gtgctgtcggagcgagccgtgttcagttacctgtgcaccgacgtgtatgtgaaggaggcc
gatgccggcgtgcgctgggatgatgcggcgatcggtatcgattggccgatcagcgatcca
ttgctctctgcaaaggacgccgctgcgccgtttctggccgatgtgcccgctgagcgcttg
ccggtgtatacaccgtga
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