Xanthomonas oryzae pv. oryzicola BLS256: XOC_3846
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Entry
XOC_3846 CDS
T01873
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00521
Streptomycin biosynthesis
xor00523
Polyketide sugar unit biosynthesis
xor00525
Acarbose and validamycin biosynthesis
xor00541
Biosynthesis of various nucleotide sugars
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01250
Biosynthesis of nucleotide sugars
Module
xor_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XOC_3846 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XOC_3846 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
XOC_3846 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XOC_3846 (rfbB)
00525 Acarbose and validamycin biosynthesis
XOC_3846 (rfbB)
Enzymes [BR:
xor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
XOC_3846 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
AEQ97936
UniProt:
G7TGZ5
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All DBs
Position
complement(3980597..3981652)
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AA seq
351 aa
AA seq
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MATWLVTGGAGFIGGNFVLEAVARGIRVVNLDALTYAGNLNTLASLEGNPDHVFVKGDIG
DGMVVARLLQEHQPDAVLNFAAESHVDRSIEGPGAFIHTNVVGTLALLEAVRDYWKSLPT
ARSDAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GKVGETYNVGGNSERQNIEVVQAICALLDQHRPRDDGKPRASQITYVTDRPGHDRRYAID
ASKLKNELGWEPAYTFEQGIAQTVHWYLTNQAWVQGVLDGSYRLERIGASA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacttggcttgtaaccggcggtgccggcttcattggtggcaactttgttcttgag
gcagtggctcgtgggatccgcgtggtcaatctcgatgcactgacctatgcgggaaatttg
aacacgttggcatccctggaaggcaatccggatcacgttttcgtcaagggcgatattggc
gacggcatggtggtcgcccgtctgttgcaggaacaccagccagacgcggtgctgaatttc
gcagccgagagccacgtggatcgctcgatcgaaggtccgggcgcattcattcacaccaat
gtcgtcgggactttagcgttgctcgaagcagtacgtgactattggaagtcgctgcctacc
gcgcgcagcgatgctttccgtttcctgcatgtctcaaccgacgaggtctacggcacgctg
ggcgaaaccggtaagttcaccgagaccacaccttacgcgccgaactcgccgtattcggcc
tccaaggcggcctcggatcatctggtacgtgcgttccaccacacctacggcctgccggtg
ctgaccaccaattgttcgaacaattatggtccgtaccacttccccgaaaagctcattccg
ctggtcatcgccaaagcgcttgccggcgagccactgccggtctacggcgacggcaagcag
gtgcgcgactggttgttcgtcagcgaccactgcgaagcgattcgcaccgtgttggcgaag
ggcaaggtcggcgagacctataacgtgggcggcaattccgagcggcaaaacatcgaggtc
gtccaggcgatctgcgcactgttggatcagcaccgtccgcgcgacgatggcaagccgcgc
gcgagccagatcacctatgtaacggatcgcccgggccatgatcgccgctacgcgatcgac
gcctccaagctgaagaacgaactgggctgggagcccgcctacaccttcgagcaaggcatc
gcgcagacggtgcattggtatttgaccaaccaggcgtgggtgcagggcgtgctggatggc
agttaccgcttggaacggatcggcgcatcggcataa
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