Xanthomonas oryzae pv. oryzicola BLS256: XOC_3870
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Entry
XOC_3870 CDS
T01873
Symbol
metB
Name
(GenBank) cystathionine gamma-lyase-like protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00260
Glycine, serine and threonine metabolism
xor00270
Cysteine and methionine metabolism
xor00450
Selenocompound metabolism
xor00670
One carbon pool by folate
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01230
Biosynthesis of amino acids
Module
xor_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XOC_3870 (metB)
00270 Cysteine and methionine metabolism
XOC_3870 (metB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
XOC_3870 (metB)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XOC_3870 (metB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xor04147
]
XOC_3870 (metB)
Enzymes [BR:
xor01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
XOC_3870 (metB)
Exosome [BR:
xor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XOC_3870 (metB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEQ97960
UniProt:
G7TH19
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All DBs
Position
complement(4007890..4009086)
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AA seq
398 aa
AA seq
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MSNRTTHSHDGDRALSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSR
THNPTRFAYERCVAALEGGTRAFAFASGMAATSTVMELLDAGSHVVAMDDLYGGTFRLFE
RVRRRTAGLDFSFVDLTDPVAFETAIRPDTKMVWIETPTNPMLKLVDIAAIAAIARKHGL
LTVVDNTFASPMLQRPLELGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQN
SIGGVQGPFDSFLALRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHRQHV
LAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELFTLAESLGGVESLVNHPAVMTHASIPV
ARREQLGISDALVRLSVGIEDVRDLRGDLAAALSGVTE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccgcaccactcatagccatgacggcgatcgcgcgctgtcgcttgcaacgctg
gcgatccatggagggcagtcgccggatcccagcaccggcgcagtgatgccgccgatctac
gccacgtccacgtatgcgcaatccagccccggcgaacaccagggcttcgaatattcccgc
acccacaaccccacgcgcttcgcctacgagcgctgcgtggcggcgctggaaggcggcacg
cgcgcgttcgcgttcgcctccggcatggctgccacttccaccgtgatggagttgctggat
gccggcagccacgtggtggcgatggacgatctgtacggcggcaccttccgcctgttcgag
cgtgtgcgccgtcgcaccgccggcctggatttcagtttcgtcgacctgaccgacccggtc
gcgtttgagacggcgatccgccccgacaccaagatggtgtggatcgaaaccccgaccaac
ccgatgctcaagctggtcgatatcgcggccatcgcggccatcgcgcgcaagcatggcctg
ctgaccgtggtcgacaatacctttgcctcgccgatgctgcagcgcccgctggaactgggt
gccgacctcgtcgtgcactcggccaccaagtacctcaacggccactcggacatggtgggc
ggcattgcggtggttggcgacaacgccgagctcgccgagcagatggcgttcctgcagaac
tccatcggtggcgtgcaaggcccgttcgacagcttcctcgccctgcgcggcctgaagaca
cttccgctgcgcatgcgcgcgcattgcgaaaatgccctggcgctcgcgcaatggctggaa
acgcaccccgccatcgaaaaggtgatctaccccggcctggcctcgcaccggcagcatgtg
ctcgcgaaacgccagatgtccggcttcggcggcatcgtctccatcgtcctcaagggcggc
ttcgacgcagccaagcgtttctgcgagaagaccgaactgttcaccctggccgaatcgctc
ggtggtgttgaaagcctggtgaaccatcccgccgtcatgacgcacgcctccatccccgtg
gcccgccgcgagcagctcggcatcagcgatgcgctggtgcggttgagcgtggggattgag
gatgtgagggatttgcgtggggatcttgccgcggcactctccggagtgaccgaatga
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