KEGG   Xanthomonas oryzae pv. oryzicola BLS256: XOC_3925
Entry
XOC_3925          CDS       T01873                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
xor  Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00010  Glycolysis / Gluconeogenesis
xor00020  Citrate cycle (TCA cycle)
xor00260  Glycine, serine and threonine metabolism
xor00280  Valine, leucine and isoleucine degradation
xor00310  Lysine degradation
xor00380  Tryptophan metabolism
xor00620  Pyruvate metabolism
xor00630  Glyoxylate and dicarboxylate metabolism
xor00640  Propanoate metabolism
xor00670  One carbon pool by folate
xor00785  Lipoic acid metabolism
xor01100  Metabolic pathways
xor01110  Biosynthesis of secondary metabolites
xor01120  Microbial metabolism in diverse environments
xor01200  Carbon metabolism
xor01210  2-Oxocarboxylic acid metabolism
xor01240  Biosynthesis of cofactors
Module
xor_M00009  Citrate cycle (TCA cycle, Krebs cycle)
xor_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xor_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
xor_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
xor_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:xor00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    XOC_3925 (lpdA)
   00020 Citrate cycle (TCA cycle)
    XOC_3925 (lpdA)
   00620 Pyruvate metabolism
    XOC_3925 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    XOC_3925 (lpdA)
   00640 Propanoate metabolism
    XOC_3925 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    XOC_3925 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    XOC_3925 (lpdA)
   00310 Lysine degradation
    XOC_3925 (lpdA)
   00380 Tryptophan metabolism
    XOC_3925 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    XOC_3925 (lpdA)
   00670 One carbon pool by folate
    XOC_3925 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xor04147]
    XOC_3925 (lpdA)
Enzymes [BR:xor01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     XOC_3925 (lpdA)
Exosome [BR:xor04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   XOC_3925 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl Pyr_redox_3 GIDA FAD_oxidored HI0933_like DAO NAD_binding_8 FAD_binding_2 Thi4 AlaDh_PNT_C MCRA 3HCDH_N DUF478 FAD_binding_3 2-Hacid_dh_C Amino_oxidase GCV_H
Other DBs
NCBI-ProteinID: AEQ98014
UniProt: G7THM9
LinkDB
Position
complement(4061798..4063609)
AA seq 603 aa
MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDVLSEGALVLLLETEGEAAAPAKAETKAAPAAAAPGSKPPVTPSHRAPAEPAPSKP
ALASGKPADIACKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKA
LLHAAAVIDEVAHAGDFGVDFGQPKITLGTLREYKEKVVGKLTGGLASMAKQRKVRTVTG
VATFVSPNELEIVGDDGKTQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALELHDI
PKTLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGVDVH
LKTKATNVTADKKGITVSFEAAVEGDKPGLQATAYDRVLVAVGRSPNGKKIGADKAGVTV
TERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIPS
VAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRVI
GGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITDLYIP
KKK
NT seq 1812 nt   +upstreamnt  +downstreamnt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggccgcgggtgtggtcaaggaactcaag
gtcaaggtcggcgacgtcttgtccgaaggcgcgctcgtgctgctgctcgaaaccgaaggc
gaggctgccgcgccggccaaggccgagaccaaggccgcaccggccgctgccgcgccgggc
agcaagccgccggtgacgccgtcgcatcgcgccccggccgaaccggcgccgtccaagccc
gcactggccagcggcaagccggccgatatcgcatgcaagatggtggtgctcggcgccggc
cccggtggctacacggccgcattccgcgccgccgatctgggcctagacacggtgctgatc
gagcgctatgccagcctcggcggcgtctgcctcaacgttggctgcatcccgtccaaggcg
ctgctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgacttcggcgtggac
ttcggtcagcccaagatcaccctgggcacgctgcgcgagtacaaggaaaaagtggtcggc
aagctcaccggcggcctggccagcatggccaagcagcgcaaggtacgtaccgtcaccggc
gtggcaacgttcgtttcgcccaatgagttggaaatcgtcggcgacgacggcaagacccag
ctgctgcgcttcgagcactgcatcatcgcggccggctcgcaggcggtgaagctgcccaac
ttcccatgggacgacaagcgcgtgatggactccaccgacgcgctggagctgcacgacatt
cccaagaccctgctggtggtcggcggcggcatcatcggtctggaaatggccacggtgtac
agcgcgctcggcagcaaggtcaccgtggtcgaattcatggaccagctgatgccgggtgcc
gacaaggacctggtcaagccgctggccgaccgtctgaagaagcagggcgtcgacgtccat
ctcaagaccaaggccaccaacgtcaccgccgataaaaagggcatcaccgtgtccttcgaa
gcggccgtggagggcgacaaacccggcctgcaggccactgcgtacgaccgcgtgctggtc
gccgtgggccgctcgcccaacggcaagaagatcggtgccgacaaggccggcgtcacggtc
accgagcgtggcttcattccggtcgaccggcagatgcgcaccaacgtgccgcacatcttc
gccatcggcgacatcgtcggtaacccgatgctggcgcacaaggccacgcacgaaggcaag
ctggccgccgaagtggctgccggcgagaagaaggaatgggtggcgcgggtgatcccgtcg
gtggcgtacaccaacccggaaatcgcctgggtcggcgtgaccgagacagaagccaaggcc
aagggcctgaaggtcggcgtggccaagttcccgtgggctgccagtggccgcgcgatcggt
atcggccgcaccgagggcttcaccaagctgatcttcgacgaagaaacccatcgcgtgatc
ggtggcgccatcgtcggtgtgcatgccggcgatctgctggccgaaattggtctggcgatc
gaaatgggtgccgaggccgaagacatcggccacaccatccatgcgcatccgaccctgagc
gaatcggtcggcatggctgccgaggtgtacgacggcaccatcaccgacctgtacattccc
aagaagaagtga

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