Xanthomonas oryzae pv. oryzicola BLS256: XOC_3925
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Entry
XOC_3925 CDS
T01873
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00010
Glycolysis / Gluconeogenesis
xor00020
Citrate cycle (TCA cycle)
xor00260
Glycine, serine and threonine metabolism
xor00280
Valine, leucine and isoleucine degradation
xor00310
Lysine degradation
xor00380
Tryptophan metabolism
xor00620
Pyruvate metabolism
xor00630
Glyoxylate and dicarboxylate metabolism
xor00640
Propanoate metabolism
xor00670
One carbon pool by folate
xor00785
Lipoic acid metabolism
xor01100
Metabolic pathways
xor01110
Biosynthesis of secondary metabolites
xor01120
Microbial metabolism in diverse environments
xor01200
Carbon metabolism
xor01210
2-Oxocarboxylic acid metabolism
xor01240
Biosynthesis of cofactors
Module
xor_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xor_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xor_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
xor_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
xor_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
XOC_3925 (lpdA)
00020 Citrate cycle (TCA cycle)
XOC_3925 (lpdA)
00620 Pyruvate metabolism
XOC_3925 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
XOC_3925 (lpdA)
00640 Propanoate metabolism
XOC_3925 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XOC_3925 (lpdA)
00280 Valine, leucine and isoleucine degradation
XOC_3925 (lpdA)
00310 Lysine degradation
XOC_3925 (lpdA)
00380 Tryptophan metabolism
XOC_3925 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XOC_3925 (lpdA)
00670 One carbon pool by folate
XOC_3925 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xor04147
]
XOC_3925 (lpdA)
Enzymes [BR:
xor01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
XOC_3925 (lpdA)
Exosome [BR:
xor04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
XOC_3925 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Biotin_lipoyl
Pyr_redox_3
GIDA
FAD_oxidored
HI0933_like
DAO
NAD_binding_8
FAD_binding_2
Thi4
AlaDh_PNT_C
MCRA
3HCDH_N
DUF478
FAD_binding_3
2-Hacid_dh_C
Amino_oxidase
GCV_H
Motif
Other DBs
NCBI-ProteinID:
AEQ98014
UniProt:
G7THM9
LinkDB
All DBs
Position
complement(4061798..4063609)
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AA seq
603 aa
AA seq
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MAVIEIKVPDIGDYSDVPVIEVLVAVGDSVAKDQGLVTLESDKATLEVPSSAAGVVKELK
VKVGDVLSEGALVLLLETEGEAAAPAKAETKAAPAAAAPGSKPPVTPSHRAPAEPAPSKP
ALASGKPADIACKMVVLGAGPGGYTAAFRAADLGLDTVLIERYASLGGVCLNVGCIPSKA
LLHAAAVIDEVAHAGDFGVDFGQPKITLGTLREYKEKVVGKLTGGLASMAKQRKVRTVTG
VATFVSPNELEIVGDDGKTQLLRFEHCIIAAGSQAVKLPNFPWDDKRVMDSTDALELHDI
PKTLLVVGGGIIGLEMATVYSALGSKVTVVEFMDQLMPGADKDLVKPLADRLKKQGVDVH
LKTKATNVTADKKGITVSFEAAVEGDKPGLQATAYDRVLVAVGRSPNGKKIGADKAGVTV
TERGFIPVDRQMRTNVPHIFAIGDIVGNPMLAHKATHEGKLAAEVAAGEKKEWVARVIPS
VAYTNPEIAWVGVTETEAKAKGLKVGVAKFPWAASGRAIGIGRTEGFTKLIFDEETHRVI
GGAIVGVHAGDLLAEIGLAIEMGAEAEDIGHTIHAHPTLSESVGMAAEVYDGTITDLYIP
KKK
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcattgaaatcaaggttcccgacatcggcgattacagcgatgtccccgtcatc
gaagtgctggtcgccgttggcgacagcgtggccaaggaccagggcctggtcacgctggaa
tcggacaaggccacgctggaagtgccgtcctcggccgcgggtgtggtcaaggaactcaag
gtcaaggtcggcgacgtcttgtccgaaggcgcgctcgtgctgctgctcgaaaccgaaggc
gaggctgccgcgccggccaaggccgagaccaaggccgcaccggccgctgccgcgccgggc
agcaagccgccggtgacgccgtcgcatcgcgccccggccgaaccggcgccgtccaagccc
gcactggccagcggcaagccggccgatatcgcatgcaagatggtggtgctcggcgccggc
cccggtggctacacggccgcattccgcgccgccgatctgggcctagacacggtgctgatc
gagcgctatgccagcctcggcggcgtctgcctcaacgttggctgcatcccgtccaaggcg
ctgctgcatgccgccgcggtgatcgatgaagtggcccatgccggcgacttcggcgtggac
ttcggtcagcccaagatcaccctgggcacgctgcgcgagtacaaggaaaaagtggtcggc
aagctcaccggcggcctggccagcatggccaagcagcgcaaggtacgtaccgtcaccggc
gtggcaacgttcgtttcgcccaatgagttggaaatcgtcggcgacgacggcaagacccag
ctgctgcgcttcgagcactgcatcatcgcggccggctcgcaggcggtgaagctgcccaac
ttcccatgggacgacaagcgcgtgatggactccaccgacgcgctggagctgcacgacatt
cccaagaccctgctggtggtcggcggcggcatcatcggtctggaaatggccacggtgtac
agcgcgctcggcagcaaggtcaccgtggtcgaattcatggaccagctgatgccgggtgcc
gacaaggacctggtcaagccgctggccgaccgtctgaagaagcagggcgtcgacgtccat
ctcaagaccaaggccaccaacgtcaccgccgataaaaagggcatcaccgtgtccttcgaa
gcggccgtggagggcgacaaacccggcctgcaggccactgcgtacgaccgcgtgctggtc
gccgtgggccgctcgcccaacggcaagaagatcggtgccgacaaggccggcgtcacggtc
accgagcgtggcttcattccggtcgaccggcagatgcgcaccaacgtgccgcacatcttc
gccatcggcgacatcgtcggtaacccgatgctggcgcacaaggccacgcacgaaggcaag
ctggccgccgaagtggctgccggcgagaagaaggaatgggtggcgcgggtgatcccgtcg
gtggcgtacaccaacccggaaatcgcctgggtcggcgtgaccgagacagaagccaaggcc
aagggcctgaaggtcggcgtggccaagttcccgtgggctgccagtggccgcgcgatcggt
atcggccgcaccgagggcttcaccaagctgatcttcgacgaagaaacccatcgcgtgatc
ggtggcgccatcgtcggtgtgcatgccggcgatctgctggccgaaattggtctggcgatc
gaaatgggtgccgaggccgaagacatcggccacaccatccatgcgcatccgaccctgagc
gaatcggtcggcatggctgccgaggtgtacgacggcaccatcaccgacctgtacattccc
aagaagaagtga
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