Xanthomonas oryzae pv. oryzicola BLS256: XOC_3949
Help
Entry
XOC_3949 CDS
T01873
Name
(GenBank) ribosomal small subunit pseudouridylate synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xor03009
]
XOC_3949
Enzymes [BR:
xor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
XOC_3949
Ribosome biogenesis [BR:
xor03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
XOC_3949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AEQ98038
UniProt:
G7THQ3
LinkDB
All DBs
Position
complement(4080319..4081032)
Genome browser
AA seq
237 aa
AA seq
DB search
MKLVKHIANLGYGSRKQVTQLFRQGAVTDAQGEVLYADDQVEHDAIRIDGEPLDPPPGFS
LLLHKPGGYTCSTKDTGRLIYELLPPRFRSRAPVLAPVGRLDRETSGMLLMTDDGALLHR
IISPKSALDKVYDITLAEDLRGDEAALFASGSLLLEGETKPLLPAELEVLGPREARLTLH
EGRYHQVRRMFAAAGNHVVALHRSRIGGLSLDGLPSGQWRALEASDLEVLFGRGAAA
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggtcaaacatatcgccaatctcggttatggcagccgtaagcaggtgacccag
ctgtttcgacagggcgcggtcaccgatgcgcagggcgaggtgctgtacgccgacgaccag
gtggagcacgacgccatccgcatcgatggcgaaccgctcgatccgccaccgggcttcagc
ctgttgctgcataaacccggcggctacacctgttcgaccaaggacaccggccggctgatc
tacgagctgttgccgccacgcttccgttcgcgtgcgccggtgctggcaccggtgggccgg
ctggaccgcgaaaccagcggcatgttgttgatgaccgacgacggcgcgctgctgcatcgg
atcatttcgcccaaatccgccctggacaaggtgtacgacatcaccctggccgaagacctg
cgtggcgacgaagccgcgttgtttgccagtggcagcttgctgttggaaggcgaaaccaag
ccgctgttgccggccgaattggaggtccttggcccacgcgaagcgcggctgaccctgcac
gaaggccgctaccaccaggtacgacgcatgttcgctgccgccggcaatcacgtggttgct
ctacatcgcagccgcattggcggcctgtcgctggatggattgccgtccgggcaatggcgt
gcgctggaagcgagcgatcttgaggtgttgttcggtcgcggtgctgccgcatga
DBGET
integrated database retrieval system
