Xanthomonas oryzae pv. oryzicola BLS256: XOC_3981
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Entry
XOC_3981 CDS
T01873
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOC_3981
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_3981
Enzymes [BR:
xor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XOC_3981
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOC_3981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Motif
Other DBs
NCBI-ProteinID:
AEQ98069
UniProt:
G7THT4
LinkDB
All DBs
Position
complement(4112181..4113611)
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AA seq
476 aa
AA seq
DB search
MEPPWSFEAWRALARAGWCAQAEPDDVAWNGGAQGGLLMGQGLLELPAVVPPPRVSADFM
QLAASVLCHRDPQRHAVLYRLLWRVACGEKALLERATDVDVHRLRHWQKAVQRDTHKMKA
FVRFRRLPGEEEDFVAWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGEALSFG
AGAVRTQVPADDAQEALWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEAALLPELIRE
AGVRVREMAERAPAPVRRRVPAAPAPQPDTTTHSLAQLRSAARDCRRCELWQPATQTVFG
EGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFTMALGELGVDRQRFYVTNAVKHFRFE
QRGKRRLHRNPERAHVQACSGWLQAERTQLRPAQIVCLGATAAQAVLGSGFRLMQERGQW
QRLDDGTPILATVHPSWVLRQPSTDAREEGYRGFVEDLRQLLNPPQPRERSFERER
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtggaaccaccgtggagttttgaagcgtggcgtgcgttggcgcgggcgggctggtgcgcg
caggcagagccggatgatgtggcctggaacggcggtgcgcagggcgggctgttgatgggg
caggggctgctggaactgccggccgtggtgccgccaccccgtgtctcggcagacttcatg
cagctggcggcatcggtgctgtgtcatcgcgatccacagcggcacgccgtgctgtaccgc
ttgttgtggcgggttgcctgcggcgagaaagcattgctggaacgcgccaccgatgtggat
gtgcaccggctgcggcactggcagaaggcagtgcagcgcgatacgcacaaaatgaaggcc
ttcgtgcgcttccgccgcttgcccggggaagaggaagacttcgttgcctggttcgagccc
gagcactggatcgtggaccgggtagcgccgtttttcgcacgccgttttgccggcatgcgc
tgggcgatcttgaccccgtatcgcagcgtgcgttgggatggcgaggcgttgagcttcggc
gcaggtgcggtgcgcacgcaggtgccggccgacgatgcgcaggaagcactgtggcgcacc
tattacgcacatatcttcaacccggcgcggctcaacccgaccatgatgcggcaggaaatg
ccgcagaaatattggaagaacctgcccgaagccgcgttgctgccggaactgatccgcgaa
gccggtgtgcgcgtgcgcgagatggccgaacgcgcgcctgcgccagtgcggcgacgggtg
ccggcggcgcctgcgccacagccggatacgacaacccacagcctggcgcagttgcgcagc
gctgcacgcgattgccggcgttgcgaactgtggcaaccggcaacgcagacggtattcggc
gaggggcccgacgatgcatcggtgatggtgatcggcgagcagccaggcgatgaagaggat
ttaagcgggcgtccgttcgtcgggcccgccgggcgcctgttcaccatggcgctgggcgag
ctgggtgtcgatcgccagaggttctacgtgaccaatgcagtcaagcatttccgtttcgaa
caacgcggtaaacggcggctgcaccgcaacccggagcgcgcgcacgtgcaggcatgcagt
gggtggttgcaggccgaacgcacgcaattgcgtccagcgcagatcgtctgcctgggtgcg
actgcggcgcaggcggtattgggaagcggcttccgattgatgcaggaacgcgggcagtgg
cagcgcctggacgatggcacgccgatcttggccacggtgcatccgtcctgggtgttgcgg
cagccatcgacggatgcacgcgaagaaggctatcgcggatttgtcgaagatctgcgtcag
ttgctgaacccgccgcagccgcgggaacgatcgttcgagagagaaaggtaa
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