Xanthomonas oryzae pv. oryzae PXO86: AZ54_01565
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Entry
AZ54_01565 CDS
T03765
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AZ54_01565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_01565
Enzymes [BR:
xoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AZ54_01565
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AZ54_01565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJQ81483
LinkDB
All DBs
Position
324911..328324
Genome browser
AA seq
1137 aa
AA seq
DB search
MHANSAPDFRLYPSNALDTLAALLAQELRRPMPGQPLLQPEVVLIPQVAMRRWLQSTLAA
EHGVAANLEFLTPGEFVARALERNLGAADDDLDMATTQWRLYATLQSDLGRDAALAPLAD
YLADGDALKPWALAGELGSVFEKYQAWRRDWLLRWEAGADPDDPQARLWRSIATGRQYRA
RRIGHYLDRHARADGPLPQGLPPRVFAFAILNISPDVLRVLATQARVGTLHFYLPTPTQG
YWGDLQTLRQRRREDGAVQLFAEHVQENPLLQAWGAAGRDFMALVGDYEVVHPLAEITAY
ADPLDSGRRTLADGGLGDSLLRRMQSDLFHRRAPAVPALLPAVNLHDPSLQVHACHTRLR
ELQVLHDQLRALLDDPRFDPPLQPREIAVLSPNIDPYVPYLDAVFGSHGNDDALPYALAD
ASPLASEPLAEVFLTLLGLPIARFGLHEILDLLASAPIAAAAGLDEAGLERLRSWLHAAG
ARWGLDAAHRRQHQAPGDDAYTWRFALDRLLLGHASGTDDDIDGVAPWPQLEGSALAALD
TLLRLLRVLERHQAVLADAMTPVEWRERLLGLLEALIPTTPTAPHAQRALDRLRTMIDQF
ARDAVRADYAGKVPAEVVRAHFAAVLGESDTRAPLLTGGISFGRMVPMRLLPFRVICLLG
MNDGDFPRRDPAAGLNRLTAELGTDRRRHGDRSTREDDRFLFLQLFASAQEVFYLSYLGA
DARDGSVREPSVLVSELLASAAHYHAASNALDTLVVRHPLQPFAAAAFGALGDESDAGAD
PRRFSYRRQWRPAVDSLVGQRQPLAPWVAGALPADDTALQASVSIDELRRLFADPAGQFL
RHRLGMRLPDPGGEDSDLEPLLAPTRGLDQYGLQQQVFEAALAGDTESLYERLRARALLP
SGPLGRRQLDERVAQLRPYADAFRQWRGQSPAESRRLQVQIGDIELHARVPGWYASGVGR
VQVGALSGRSAIRHGLEWLLLRAAGEHAPYVRFFELDDGLGPHPIDAQPLSQPQAQTALA
ELLQLYRHGLQTPLAFAPYSSWKYHQAARGDDLDKAIKDAAGQWQSGFGWSESHSPELRL
VNRGRDPFADAQRFADFATTSHRVYALLEQGDSGAPLDAERLIDSWRHWHGAQEDAE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcacgccaattccgcgcccgatttccgtctttatccatccaatgcgctggataccctg
gccgccttgctcgcgcaggagttgcgccggccgatgccggggcagccgttgctgcagccg
gaggtggtgctgattccgcaggtggcgatgcggcgctggctgcagtccacgttggcggcc
gagcacggtgttgcggcgaatctggaatttctcacgcccggcgaattcgttgcgcgtgcg
ctggagcgcaacctcggcgcggccgacgacgacctggacatggccaccacgcagtggcgg
ttgtatgcgaccctgcaatcggacctgggccgcgatgcggcgttggcacccctggccgac
tatctggccgatggcgatgcactcaagccgtgggcgctggccggcgagttgggcagcgtg
ttcgaaaaataccaggcatggcgccgcgactggctgctgcgctgggaagcgggcgccgac
ccggacgacccgcaagcccggttgtggcgcagcatcgccaccggccgccaataccgcgca
cggcgcatcggccactatctggatcgccatgcgcgcgccgatggcccgttgccgcaaggg
ttgccgccgcgtgtgttcgccttcgccatcttgaatatctcgccggacgtcttgcgcgtg
ctggccacgcaagcgcgcgtgggcacgttgcatttctatctgcccacgcccacgcagggg
tactggggcgacctgcagacgttgaggcaacgccggcgcgaagacggcgcggtgcagttg
tttgccgagcacgtgcaggagaacccgctgctgcaagcctggggcgcggccgggcgcgat
ttcatggcgctggtgggcgattacgaagtggtacacccattggccgaaattacggcctat
gccgacccgctcgattccggccgtcgcacgttggccgatggcgggctgggcgacagcctg
ctgcggcggatgcagagcgacctgttccatcgccgcgcgccggcggtgcctgcgttgttg
cctgcggtgaatctgcacgaccccagcctgcaggtgcacgcctgccacacgcggctgcgc
gagctgcaggtactgcacgaccaactgcgcgcgctgctcgacgacccgcgcttcgacccg
ccgctgcagccgcgcgagattgcggtgctgtcgcccaacatcgacccgtacgtgccgtat
ctggacgcggtgttcggcagccatggcaacgacgatgcgctgccctacgcgctggccgat
gccagtccgttggccagcgagccgctggccgaagtgtttttgaccttgctcggcttgccg
atcgcgcgtttcggtctgcatgaaatcctcgacctgctggccagcgcgccgatcgccgcc
gccgccgggctggacgaggccgggctggaacgcctgcgcagctggctgcacgcggcgggc
gcgcgctgggggctggatgccgcgcatcggcggcagcatcaggcaccgggcgacgatgcc
tacacctggcgctttgcgctggaccggctgctgcttggccatgccagcggcaccgacgac
gacatcgatggcgtggcgccgtggccgcaactggaaggcagcgcgttggccgcgctcgat
accttgttgcggctgctgcgggtgctcgaacgccatcaggcggtgctggccgacgcgatg
acgccggtggagtggcgcgagcggttgctgggactgttggaagcattgattccgaccacg
cccaccgcgccgcatgcgcagcgcgcgctggatcgcttgcgcacgatgatcgaccagttc
gcccgcgatgcagtgcgcgccgactacgccggcaaggtgccggccgaggtggtgcgtgcg
catttcgctgcggtattgggcgagtcggacacgcgcgcgccgctgctcaccggcggcatc
agtttcggccgcatggtgccgatgcgcttgctgccgttccgcgtgatctgcctgcttggt
atgaacgatggcgatttcccgcgccgcgacccggccgccgggctcaatcgcctgaccgct
gaactgggtaccgaccgtcgccggcatggcgaccgttccacgcgcgaggacgaccgcttc
ctgttcctgcagttgttcgcctccgcgcaagaggtgttttacctcagctatctcggtgcc
gatgcgcgcgatggcagcgtgcgcgaaccgtcggtgctggtcagcgagttgctggcaagc
gccgcgcactaccacgccgccagcaatgcgctcgacacgctggtggtgcggcatccgttg
cagccgttcgccgctgccgcattcggtgcgctgggcgatgagagcgatgccggtgccgac
ccgcgtcgtttcagttatcgccggcaatggcgcccggcggtggacagcctggtcggtcag
cggcagccgctggcaccgtgggtggccggtgcattgccggccgacgacactgcgttgcag
gccagcgtgtccatcgacgaactgcgccggctgtttgccgacccggccgggcagtttctg
cgccatcgcctgggcatgcgcctgcccgatccgggcggcgaagacagcgatctggaaccg
ttgctcgcacccacgcgcgggctggaccaatacggcttgcagcagcaggtcttcgaagcc
gcattggccggcgacaccgaaagcctgtacgagcgcctgcgcgcgcgggcgctgctgcca
tccggcccgctggggcggcgccagctcgacgagcgcgtggcgcaattgcgcccgtatgcc
gatgcgtttcggcagtggcgtggccagtcgccggccgagtcacgccggctgcaggtgcag
atcggcgatatcgaacttcacgctcgtgtgccgggctggtatgcaagcggcgtcgggcgc
gtgcaggtcggcgccctcagcggccgcagcgccattcgccatgggctggaatggttgttg
ctgcgcgccgccggcgaacacgcgccgtacgtgcgtttcttcgaactcgacgacggcctg
ggcccgcatccgatcgatgcgcagccgctgtcgcagccgcaggcccagaccgcattggcc
gagctgctgcagctgtatcgccatggcttgcaaacgccgctggcgttcgcgccttacagc
agttggaagtaccaccaggctgcgcgcggcgacgatctggacaaggccatcaaggacgcg
gccgggcagtggcaatcgggcttcggctggagcgaatcgcacagcccggaactgcgcttg
gtcaaccgcggccgcgacccgtttgccgatgcgcaacgcttcgccgatttcgccactacc
agccatcgtgtgtacgcattgctcgaacaaggcgatagcggcgcgccgctcgatgccgag
cgcttgatcgacagctggcggcattggcacggcgcgcaggaagatgccgaatga
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