Xanthomonas oryzae pv. oryzae PXO86: AZ54_02775
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Entry
AZ54_02775 CDS
T03765
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03030
DNA replication
xoy03410
Base excision repair
xoy03420
Nucleotide excision repair
xoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZ54_02775
03410 Base excision repair
AZ54_02775
03420 Nucleotide excision repair
AZ54_02775
03440 Homologous recombination
AZ54_02775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoy03032
]
AZ54_02775
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_02775
Enzymes [BR:
xoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZ54_02775
DNA replication proteins [BR:
xoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AZ54_02775
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AZ54_02775
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZ54_02775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
AJQ81673
LinkDB
All DBs
Position
573078..575879
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDALYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNTETLAVLYARYGFTQALRELGGALAQSGLLSEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPALSAPGAYETILTQEQLDSWIAQLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGKAAYLPFGHNFPGAPVQLDRTHALAQLAPLLTDPAVR
KVGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLDDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEDALEAIADQHELPRVILEYRGLSKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMA
HLSGDPGLVGAFASGTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADVDFVDT
LLSEVTTRMASAAELRVPLVVDSGVGDDWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgaacccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgtccggcctacatcgccttcgtggtggatgcacccggc
aagaccttccgtgacgccttgtatgccgactacaaggccaaccggccgtcgatgcccgac
gacctgcgcgcgcaggtacagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcaggccgct
gccgatgggttgagcgtgaccatctccaccggcgacaaggactttgcccagctggtgcgc
ccgggtatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtcgacaacgtgcccggcgtggaaaaatgcggtcccaagactgccgccaaatggctt
gccgaatacgattcgctggacggcgtgatcgccaatgccgacaagatcaagggtaagatc
ggcgacaacctgcgcgctgcgttgccacgcctgccgctcaaccgtgagctggtcacgatc
aagaccgatgtgaccctggccagcggcccgcgcgcgctggatctgcgcgaacccaacacc
gaaacgctagcggtactgtacgcgcgctacgggtttacccaggcgctgcgcgagctgggc
ggcgcgctggcgcagtccggtctgttgtccgagccggtggcgctgggcgctgccgctgct
accgcgcgcaccgagccgggccgtgcgcgcggcaccggcttcgtgtccgggccggtcaat
gcagcggtggacctggatccagcgctgtcggcgcctggcgcgtacgagaccatcctgacc
caggagcagctggacagctggatcgcgcagctgcgcgccgccggccagttcgctttcgat
accgaaaccgacagcctggacccgctgcaggccgacctgatcggcctgagcgtggccgcc
gagccaggtaaggcggcgtatctgccgttcggccacaactttcccggcgccccggttcag
ctcgaccgcacccatgcgctggcgcaactggcgccgctgctcaccgacccggccgtgcgc
aaagtcggccaacacggcaagtacgacctgcacgtgatgcgccggcatggcgtggagctt
gccggctacgccgacgacacactgctggagagcttcgtgctcaattccggcagcgcccgt
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtttgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggacgatgccacc
cgctacgccgccgaagacgccgacatcaccctgcgcctgcatcacgtgctcggccccaag
ctggcagccgagcccggcctggagcgcgtctaccgcgacatcgaaatgccactggtggac
gtgctggcgcgcatcgaagccaacggcgtgtgcgtggacgccgccgaactacgccgtcag
agcgcggacctgtccaagcgcatgctcgccgcccagcaaaaagccaccgagctggcaggg
cgcaccttcaacctggattcgcccaagcagctgcaggcgctgttgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagacgcgctggaa
gccatcgccgaccagcacgagctgccgcgggtgatcctggaataccgcggcctgagcaag
ctgcgcagtacctacaccgacaagctgccggagatgatccacccgcagtccggacgcgtg
cacaccagctaccaccaggccggcgccgccaccggtcggctgtcttcatcggacccgaac
ctgcagaacatcccgatccgcaccgaagacggccgccgcatccgccgcgctttcgtcgcc
ccgcccgggcgcaagctgatcgcctgcgactactcgcagatcgagctgcgcatcatggcc
cacctgtccggcgaccccggcctggtcggcgcgttcgcgtccggcaccgacgtgcaccgc
gccactgccgccgaagtattcggccgcaccatcgacaccgtcagcggtgacgagcgccgc
gctgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggtctggcccgc
cagctcggcatcggccgtggcgaagcgcaggactacatcgcgctgtacttcagccgctat
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaaccgtgttcggccgccgcctgtatctggatttcatcaatgccggcagccagggccag
cgtgcaggcgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgccgacatc
atcaagcgcgccatggtcaaggtggacggctggatcgccgaccacgcgcaacgcgccaaa
atgatcctgcaggtgcacgacgaactggtgttcgaagccgatgtcgatttcgtcgacaca
ctgctcagcgaagtcaccacgcgcatggcctccgcagctgaattgcgcgtgccgttggtg
gtggattcgggcgtgggcgatgactgggatcaggcgcactga
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