Xanthomonas oryzae pv. oryzae PXO86: AZ54_04025
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Entry
AZ54_04025 CDS
T03765
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy00550
Peptidoglycan biosynthesis
xoy01100
Metabolic pathways
xoy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AZ54_04025
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AZ54_04025
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xoy01011
]
AZ54_04025
Enzymes [BR:
xoy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AZ54_04025
Peptidoglycan biosynthesis and degradation proteins [BR:
xoy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AZ54_04025
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AJQ81894
LinkDB
All DBs
Position
825105..827165
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AA seq
686 aa
AA seq
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MHGHRHPKNPHAEAEQFRRRAVLGFAMVLICLVGLGGWYFKLQVLDHEVYATRSEANRIK
PKPVVPGRGMIYDRTGRLLAENVPAFRLDVTPDKVTDMSAMLDALGNVIPISPEDLERFN
RERHARRSFLPVTLKLRMSDEEMARFAVERWRFPGVELEPYLTRRYPYGPLFAHIIGYVG
RIDEKDLAVLGEGNAALTHMGKSGLERYYEQDLRGQVGYEQVETNVQGRAIRTVGRVAPQ
SGADLRLSVDADLQRAMVAAFGEHEGAAIAMDPRTGEILGMVSLPSYDPNLFVNGISHTD
FKMLNDNPSRPQFNRLVLGGVAPGSTLKPLIALAGLDSGVRRPEDRVLSTGMFYLPGVSR
GWGDSHRGGHGWTDLRKSIAQSVNTYYYRLAVDMGIERFDHYLGEYGFGQPTGVDLLGEI
GGILPSPAYKYKTRKERWYPGDTVNIAIGQGDWKVTPLQLVRGVSAIASGLLLRPHLVLE
ERTGFDHPWEPMIQPPGKPISPNPAHLQVVREGMMDTMRPGGTGYAITPGAPYQMAGKTG
TAQVVSRKGVAAVDPRSLPLHLRHRGLFVGFAPADHPVIAVAVAVEGGGFGTSSAAPIAR
KIFDAWLLGKMPAGLEPLDSELGMTAVGVNRFEAGVTDARAAGDAAAATLDELPVVVGQT
AVALDPNTPAQPVVPDVPDAVQETDH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggcaccgtcatcccaagaatccgcatgccgaggccgaacagttccgccgccgt
gcggtgctgggctttgcgatggtgctgatctgcctggtcggcctgggcggttggtacttc
aagttgcaggtgctcgatcacgaggtgtatgccacgcgctcggaggccaatcgcatcaag
cccaagccggtagtgcccgggcgcggcatgatctacgaccgcaccggccggctgctggcc
gaaaacgtgccggccttccgcctggacgtgacccccgacaaggtcaccgacatgagcgct
atgctggacgcgctcggcaacgtcatcccgatctcgccggaggacttggagcgcttcaac
cgcgagcggcacgcacgacgcagcttcctgccagtgacgctcaagctgcgcatgagcgat
gaagagatggcgcggtttgcggtggagcgctggcgcttccccggcgtggagctggagccg
tatctgacccgccgttatccctatggtccgttgttcgcgcacatcatcggctatgtgggc
cgtatcgatgaaaaagacctggcggtgctgggcgagggcaatgccgcgctgacccacatg
ggcaaatccgggctggagcgctattacgagcaggatctgcgcgggcaggtcggttacgag
caggtcgaaaccaatgtgcaggggcgggcgatccgcaccgttggccgggtcgcgccgcaa
tcgggtgcggacctgcgcctgtcggtagacgccgatctgcagcgcgcaatggtggcggca
ttcggcgagcacgaaggcgcggccatcgcaatggacccgcgcaccggcgagatcctgggc
atggtcagcctgcccagctacgaccccaatctgttcgtcaacggcatctcgcataccgat
ttcaagatgctcaacgacaacccgtcgcggccgcagttcaatcgcctggtgctgggcggc
gtggcgccgggctccacgctcaagccgctgatcgcgctggctggcctggacagcggcgtg
cgccggccggaagaccgggtgttgtccaccggcatgttctacctgcccggcgtgagccgc
ggctggggcgattcgcaccgcggcgggcatggctggaccgacctgcgcaaatccatcgcc
cagtcggtcaatacctattactaccgcctggcggtggatatgggcatcgagcgcttcgac
cactacctgggcgaatacggcttcggccagcccaccggtgtggatctgctgggcgaaatc
ggcggcatcctgccgtcgccggcctacaagtacaagacccgcaaggagcgctggtatccc
ggcgacacggtcaatatcgcgattggtcagggcgactggaaggtgacgccgctgcagctg
gtgcgcggcgtctcggcgatcgccagtggcctgctgctgcgcccgcatctggtgctggaa
gaacgcaccggcttcgatcacccgtgggaaccgatgatccagccgccgggcaagccgatc
agcccgaatccggcgcatctgcaggtagtgcgcgaaggcatgatggacaccatgcggccc
ggcggcaccggctatgccatcacgcccggtgcgccgtaccagatggccggcaagaccggt
accgcgcaggtggtcagccgcaagggcgtggcggcggtggacccacgcagcttgccgttg
cacttgcgccaccgcggtctgttcgtcggctttgcgccggccgatcacccggtcatcgcg
gtggcagtggcggtggaggggggcggcttcggtaccagctcggcggcgccgattgcgcgc
aagatcttcgatgcctggctgctgggcaagatgcccgccggcctggagccgttggacagc
gagctcggcatgaccgccgtaggcgtcaatcggttcgaagccggcgtcaccgatgcgcgc
gcagccggcgatgcggcagccgccacgctggacgagctgccggtggtggtcggacagacc
gccgttgcgctggaccccaacacgcccgcgcaaccggtggtgccggatgtgccggacgcg
gtgcaggagaccgaccattga
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