Xanthomonas oryzae pv. oryzae PXO86: AZ54_11025
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Entry
AZ54_11025 CDS
T03765
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy02020
Two-component system
xoy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AZ54_11025
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AZ54_11025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xoy03021
]
AZ54_11025
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xoy02035
]
AZ54_11025
Transcription machinery [BR:
xoy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AZ54_11025
Bacterial motility proteins [BR:
xoy02035
]
Flagellar system
Flagellar assembly proteins
Stator
AZ54_11025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AJQ83066
LinkDB
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Position
complement(2256656..2257411)
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AA seq
251 aa
AA seq
DB search
MNTTAAAQYRAVQRNNADNVVTQHADLVRRIAHHLAARLPASVEVDDLIQAGMIGLIEAS
RSYDSEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAVRKIEQNTGRAAA
AAEVAAAMEMPLPDYLRLMEDAARGQVLSLESRIEDHGELDTTAKGGPNPQQMMERSEFG
RELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGRLKVF
ELADAGVEIDE
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaccgccgcagcgcagtaccgtgccgtccagcgcaacaacgccgacaacgtg
gtaacccagcacgccgacctggttcgccgcatcgcccaccacctggccgcgcgtctgccg
gccagcgtggaagtggacgatctgatccaggctggcatgatcggcctgatcgaggcttcg
cgcagctatgactccgaacagggcgcctcgttcgaaacctacgcctcgatccgtatccgc
ggttcgatgatcgacgaaatccgccgcggcgactgggtgccgcgctcggtgcaccgccgc
gcccgcgatgccgctgccgctgtgcgcaagatcgaacagaacaccggccgcgccgctgcc
gccgccgaagtggccgccgcaatggaaatgccgctgcccgattacctgcgtctgatggaa
gacgccgcacgcggccaggtgctgagcctggaatcgcgcatcgaagatcacggcgagctg
gacaccaccgccaagggtggccccaacccgcagcagatgatggaacgtagcgaattcggc
cgcgaactgggcaaggccatcggccaattgcccgagcgcgagcagctggtgctgtcgctg
tactacgaacaggaattgaatctgaaagaaatcggcgccgtgctcggtgtcagcgaatcg
cgcgtctgccagatccacggccaggcggtggtgcgtttgcggggccgcctcaaagtcttc
gaactggccgatgccggtgtcgaaattgacgaataa
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