Xanthomonas oryzae pv. oryzae PXO86: AZ54_12015
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Entry
AZ54_12015 CDS
T03765
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AZ54_12015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xoy03019
]
AZ54_12015
03009 Ribosome biogenesis [BR:
xoy03009
]
AZ54_12015
Messenger RNA biogenesis [BR:
xoy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AZ54_12015
Ribosome biogenesis [BR:
xoy03009
]
Eukaryotic type
Pre-60S particles
RNases
AZ54_12015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF2252
Motif
Other DBs
NCBI-ProteinID:
AJQ83244
LinkDB
All DBs
Position
2462962..2463546
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AA seq
194 aa
AA seq
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MAENLAGNDRLIWIDLEMTGLDTDRDSIIEIATIVTDAQLNVLAEGPELAIAHPLETLEA
MDEWNRNQHRRSGLWQRVLDSQVTHAQAEAQTVAFLGEWIRAGASPMCGNSICQDRRFLH
RQMSRLERYFHYRNLDVSTIKELARRWAPTVANGFAKSSAHTALSDVRDSINELRHYRQF
MGALGGDTAMDVEG
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaccttgcaggcaacgaccgactgatctggatcgatctggaaatgaccggc
ctggataccgatcgcgattcgattatcgagatcgccaccatcgtgaccgatgcgcagttg
aacgtgcttgccgaggggccggaactggccatcgcgcatccgctggaaaccctggaagcg
atggacgagtggaaccgcaatcagcaccgccgttcgggtctttggcagcgcgtgctcgac
agccaggtcacccatgcgcaggccgaagcgcagaccgtggcattcctgggcgagtggatc
cgcgctggcgcctcgccgatgtgcggcaactcgatctgccaggatcgccgcttcctgcat
cggcagatgtcgcgccttgagcgctatttccattaccgcaatttggatgtgtccaccatc
aaggaacttgcgcggcgttgggcgccgacggtggccaatgggtttgccaagagttctgcg
cataccgccctcagcgatgtgcgcgattcgatcaatgagctgcgtcactaccgtcagttc
atgggtgcacttggtggcgataccgctatggatgtggaaggctga
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