Xanthomonas oryzae pv. oryzae PXO86: AZ54_12595
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Entry
AZ54_12595 CDS
T03765
Name
(GenBank) succinate dehydrogenase
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy00020
Citrate cycle (TCA cycle)
xoy00190
Oxidative phosphorylation
xoy00650
Butanoate metabolism
xoy00720
Other carbon fixation pathways
xoy01100
Metabolic pathways
xoy01110
Biosynthesis of secondary metabolites
xoy01120
Microbial metabolism in diverse environments
xoy01200
Carbon metabolism
Module
xoy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xoy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xoy_M00149
Succinate dehydrogenase, prokaryotes
xoy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
AZ54_12595
00650 Butanoate metabolism
AZ54_12595
09102 Energy metabolism
00190 Oxidative phosphorylation
AZ54_12595
00720 Other carbon fixation pathways
AZ54_12595
Enzymes [BR:
xoy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
AZ54_12595
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
GIDA
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AJQ83339
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Position
complement(2577291..2579081)
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEDGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNFYGEVVRNQGDDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKPNQPHKTLPSYACDKALGLLDKLRHANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFDYRPVHMYTLSKDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcacagaacacaagtacgacatggtcgtggtgggcgccggcggc
gctggcctgcgtgccacgttcggcctggcccagaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttcgcacaccgtggcagcgcagggcggcatttccgcagcgttg
ggcaacatgggcgaagacgactggcgttatcacttctacgacaccatcaagggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgccgcgaagcgattccggccatcatc
gaactcgaacactacggcgtgccgttctcgcgtaccgaagacggcaaaatctaccagcgc
ccgttcggcggcatgaccaccaagtacggcgagggcccgtccgcgcagcgcacttgcgcc
gcagccgaccggactggccacgcgatgctgcacacgctctaccagcagtcgctggcgcac
aacgcacgcttcatgatcgagtacttcgcactcgatctgatcttcgacgaagaaggtgtc
tgccgcggcgtactcgcactggatatggccgaaggctcgctgcatctgttccgcgcccac
ggcgtggtgctggcgaccggcggttacggccgcgcctacttcagcgcgacctccgcgcac
acctgtaccggtgatggcggtggtttggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcctaccggtatctacggtgcgggctgtctgattaccgaaggc
gtgcgcggcgaaggcggcattctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggatctggcgtcgcgcgacgtggtgtcgcgctcgatgacggtcgaa
atccgcgaaggccgtggcgtgggcgagcacaaggatcacatcctgctcgacctgacgcac
ctcggcccggaagtcatcaacgaaaagctgcccggcattgccgaaagcgcgcacatcttt
gccggtgttgacgtgaccaagcagccgattccggtgctgccgaccgtgcactacaacatg
ggcggcattcccaccaacttctacggcgaagtcgtgcgcaatcagggcgacgatcctgat
gcagtggtgccgggcctgtacgccattggcgaagcggcgtgcgtgtccgtgcacggtgca
aatcgtctgggttcgaattcgctgctggatctggtggtgttcggtcgtgcggtggccaac
cgctgcgccgagacggtcaagcccaatcagccgcacaagaccttgccgtcgtatgcctgc
gacaaggcgctgggcctgctggacaagttgcgtcacgccaacggctccacgccgacctcg
gtgatccgtgacaacatgcagcgcaccatgcagtccgacgctgccgtgttccgcaccagc
aagacgctgaaggagggcgttgacaagatggccgagatcttcgccaccttcgaagacgtc
aaggtgtcggaccgctcgctggtgtggaactcggacctgatcgagacctacgagttgaac
aacctgctgctcaacgcagtggcgacgatcaattcggccgaacagcgcaaggaaagccgc
ggcgcgcattcgcacgaagacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtgaccgtcgacgacaagggcaagtgcgagttcgattaccgtcctgtgcatatgtat
acgctgagcaaggatgtggacgtggtcccgccgaagccgcgcgtttactga
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