Xanthomonas oryzae pv. oryzae PXO86: AZ54_14970
Help
Entry
AZ54_14970 CDS
T03765
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xoy03016
]
AZ54_14970
Enzymes [BR:
xoy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AZ54_14970
Transfer RNA biogenesis [BR:
xoy03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AZ54_14970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJQ83732
LinkDB
All DBs
Position
complement(3065301..3065903)
Genome browser
AA seq
200 aa
AA seq
DB search
MKQQFLYLSSAQAQLSLGLGDEKTTERLFFAVMADAPTAEQAARIADSLLQGGHAEGKPL
ARERLHVTLHHLGDYAGGLPPSLVSRATQAAARVAMDAFAVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYALQGALGTQLAHVGIAGDAQYTPHMTLLYCNQAVPQRRCDALAWTVRDFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacagttcctgtacctatcgtcggcccaagcgcagttgtcgcttgggcttggg
gatgagaagaccactgaacgcctgttttttgcggtgatggccgatgcgcccacggccgag
caggcggcgcggattgccgacagcctgctgcaaggcgggcacgcggaaggcaagccactt
gcgcgcgaacggctgcatgtgaccttgcatcatttgggcgattacgccggtggtttgccg
ccatcgttggtaagccgcgccactcaggccgcggcgcgcgtcgcaatggatgcgttcgca
gtggaattcgaccgcgtcggcaccttcggtggcaggcgctcgcaacttccctgcgtgttg
cgtggcgaagagcaggtacgtgggctctacgcgctgcaaggcgcattgggaacgcagctt
gcgcatgtcggtattgccggcgatgcgcagtacacgccacacatgacgctgctgtactgc
aatcaggcggtgccgcaacgacgctgcgatgcgcttgcctggacggtgcgcgactttgcg
ctggtgcgcagctttcttggccagtcgcgttatcagatcgaaggccgctggtcgctgcgc
tga
DBGET
integrated database retrieval system
