KEGG   Xanthomonas oryzae pv. oryzae PXO86: AZ54_15140
Entry
AZ54_15140        CDS       T03765                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xoy  Xanthomonas oryzae pv. oryzae PXO86
Brite
KEGG Orthology (KO) [BR:xoy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xoy03400]
    AZ54_15140
Enzymes [BR:xoy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AZ54_15140
    5.6.2.6  RNA 3'-5' helicase
     AZ54_15140
DNA repair and recombination proteins [BR:xoy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    AZ54_15140
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AJQ83763
LinkDB
Position
3096226..3098727
AA seq 833 aa
MSATRPPHGTPLQQWLAWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGG
PLLEALAARGRKSPRKPGKPTSPARRQQQRNLQVLWITPLRALTADTTRALREPVDALGL
DWQVGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYPDTALQLSALRCVIVDEWHE
LLGNKRGVLLQLCLARLRGWTPQLRIWGLSATLGNLSQARDVLLPHRPNAALVSGVKPRT
MTLETLLPDSGERFPWAGHLGLAQLARVLQKIMQQRTSLVFTNTRAQAELWHQALSAVWP
DDLATLALHHGSLDPSLRAAAERGLADGSLRCVVATASLDLGVDFPAVDQVLQIGSPKGI
ARLLQRAGRARHRPGESGHVVCVPSHALELVEYAAAHRALVHGHIEARPPPRLSLDVLAQ
HCVTLALGGGFHADALFDEVRGTDAFAALEKPTWNAVLDFIVQGGSALAHYPDFHKVVRD
DDGMYRVIDRRVALRHRLSIGTITSDGSVRVQFLRGGQLGAVEEQFIGRLRRGDRFQFAG
RLLELVRLEDMTAYVRVAKGGSGVVPKWMGGRMPLSSALGREVEAVFADPGDAPEMQALA
PLLQLQASLSSLPAPDHLLVESIKARDGRHVFVYPFAGRQVNEGLAALLAARWGRRQRNT
FSFAANDYGFVLSPAQDVEIDADVLQTLLSPVNLFADLRDSLNLGELARRQFREIARVAG
LLSPSLPGRAPRSLRQLQASSGLLYDVLQRFDPDHLLLAQAEREVFEGQLELARLAHALE
DCARRALRLCKPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAEQLERKHGR
NT seq 2502 nt   +upstreamnt  +downstreamnt
gtgagtgccacgcggccgccgcatggcacgccattacagcaatggcttgcctggttcgcg
cagcgtggctgggcgccgctgccgtttcaacgcgatgtgtggaagcgctatctcgatggc
gaatccggcctgctgcacacgcccaccggcagcggcaagacgctggcggcatttggcggg
ccgttactggaggcattggccgcgcgtgggcgcaaatccccgcgcaaaccgggcaaaccc
acctcacctgcgcgccgccagcaacaacgcaatctgcaagtgttgtggatcacgccattg
cgcgcactgaccgccgacaccacacgcgcactgcgcgagccggtggacgccttggggctg
gactggcaggtgggcctgcgcaccggcgatgccagcgcgcgcgacaagcgcctggcacgc
agcggcaagctcgatgtgctggtcaccacgcccgaatcgctggccttgctgttgtcgtat
ccggataccgcgctgcagctgtcggcgctgcgctgcgtgatcgtcgacgagtggcacgaa
ctgctcggcaacaagcgcggtgtgctgctgcaattgtgtcttgcgcgcttgcgcggatgg
acgccgcagctacgcatctgggggctgtcggcaacgctgggcaatttatcgcaggcacgc
gatgtgctgttgccgcatcgccccaacgctgcgctggtctccggcgtcaaaccgcgcacg
atgaccctggaaaccttgttgccggacagtggcgagcgctttccctgggcgggccatctt
ggtctggcgcaactggcgcgcgtgctgcagaagatcatgcagcagcgcaccagcctggta
tttaccaatacccgcgcgcaggccgagttgtggcatcaggcattgagtgcggtgtggccg
gacgatctggccacgctcgcgctgcatcacggctcgctggatccatcgctacgcgccgcc
gccgaacgcgggttggccgatggcagcctgcgctgcgtggtggccaccgccagcctggat
ctgggcgtggacttccctgccgtggatcaggtgttgcagatcggcagcccgaaaggcatt
gcgcgccttctgcaacgcgccgggcgcgcgcgccatcgccccggcgaatccggccacgtg
gtgtgcgtaccctcgcatgcgctggaattggtcgaatatgccgcggcacaccgcgcactg
gtgcatggacatatcgaagcgcgtccaccgccgcggttatcgctggacgtgctggcacaa
cattgcgtcaccctcgccctcggcggtggcttccatgccgatgcgttgttcgacgaagtg
cgcggtaccgatgccttcgctgcgctggaaaaacccacctggaacgcggtgctggatttc
atcgtgcaaggtggcagcgcattggcgcattaccctgatttccataaggtggttcgcgac
gacgacggcatgtaccgcgtgatcgaccggcgcgtcgcgctccggcatcggctgtccatc
ggcacgatcaccagcgacggcagcgtgcgcgtgcagttcctgcgcggcgggcagctgggc
gcggtggaagaacaattcatcggccgcctgcgccgcggcgatcgcttccagttcgccggc
cgcttgctggagctggtgcgcctggaagacatgaccgcctacgtgcgcgtggccaagggc
ggcagtggcgtggtgccgaaatggatgggcggacgcatgccgttgtcgtcggcactgggc
cgcgaggtggaagcggtgttcgccgaccccggcgacgcgccggagatgcaggccttggcg
ccattgttgcagctgcaggcctcgctctcatcgttgcctgcgccggatcatctgctggtg
gaaagcatcaaggcgcgcgatggccggcatgtgttcgtgtacccgttcgccggccggcag
gtcaacgaaggcctggccgcgttgctcgcggcgcgttggggccgacgccagcgcaatacg
tttagctttgcggctaacgactatggctttgtgctgtcgccggcgcaggatgtcgagatc
gatgccgatgtgctgcagaccctgttgtcgccggtgaacctgttcgccgatctgcgcgac
agcctcaatctgggcgagctggcgcgccggcaatttcgcgagatcgcgcgcgtggccgga
ctgttgtcgccctcgttgcctgggcgggcgccgcgcagcctgcggcagctgcaggcctcc
agcggcttgctgtacgacgtgttacagcgtttcgacccggatcacttgctgcttgcgcaa
gccgaacgcgaggtgttcgaaggccagctcgagctcgcgcggcttgcgcatgcgctggaa
gattgcgcgcgccgcgcgttgcgcctgtgcaaaccgcgcagcctcactccgttgtcgttt
ccgctctgggccgaacgcgtgcgcgggcaactgagtaccgaagactggaaggcgcgcgtc
ttgcgcgctgccgaacaactggagcgcaagcatgggcgatag

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