Xanthomonas oryzae pv. oryzae PXO86: AZ54_19210
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Entry
AZ54_19210 CDS
T03765
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03030
DNA replication
xoy03430
Mismatch repair
xoy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZ54_19210
03430 Mismatch repair
AZ54_19210
03440 Homologous recombination
AZ54_19210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoy03032
]
AZ54_19210
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_19210
Enzymes [BR:
xoy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZ54_19210
DNA replication proteins [BR:
xoy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZ54_19210
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZ54_19210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
ResIII
AAA_18
AAA_7
PIF1
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_24
AAA_2
SKI
Motif
Other DBs
NCBI-ProteinID:
AJQ84466
LinkDB
All DBs
Position
complement(3977478..3979574)
Genome browser
AA seq
698 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDLSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLMQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGTTAGGGARSAAAGSQAAAPALAAPVTAAPPMVAATAAVTDTMPVAAAE
ASLPASATQATPTPAAAPAPAPVVMLPPQESSSPSRASAASARIDDTPPWAVDDAPVRTQ
ATTASDTMAVLAPEAAMASPSSAPVELAQPVAIASDAAEDAPVSVATSSPAALVEPSSFA
EPAVVTPPATAVSAADSAADASALLDDGCIADAEQWLELVTRSGLNGPSRQLAANAAFIG
HRDGVLRLALAPGFEYLHSERSIANLAQALAPVLGNTPRIVIETGSADVETLHERANRQK
GERQSAAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccattgcgcgcatcttcgccaag
tcgctcaactgcgagaccggtacaagtgccgacccatgcggccagtgcccggcctgcctg
gacatcgacgccggtcgttacatcgacctgctggagatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtttacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgctgctc
aagacgctggaagagccgccggagcacgtgaagttcctgctggctaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcggctggacgag
gaccagattcagggccagatgacccgcatcctggccgccgagcagatcgaatcggatctg
tcggcgattgtgcagctgtccaaggcagccgacggctcgttgcgcgatggcctgtcgctg
ctggatcaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ttgggcacggtcgatcgcacccaggtcggcgcgatgctgcaatcgctggccgatggcgat
ggcgcgcgcctgatgcaggtcgtggccgcgctggctgagttttcgcccgattggagcggg
gtgttggaggccctggccgaggcgttgcatcgcgtgcaggtgcagcagctggtgccgtcg
gtggcctttgttggcgacggcatcgacccgactccttttgcggcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgtgatctgtatctggcgccc
agtccgcgcgctggcttcgagatggcagtgctgcgcatgctcgccttccgccccgctgcg
gcggtgccggctggcggctcggacgacggacgcggcaccacggcgggcggtggtgcgcgt
tctgccgctgccggcagtcaggctgctgcgccggcactggcagcgccggtgacagctgcg
ccccccatggtggccgcgactgctgcggtgacggatacgatgcctgtggcggcggcggag
gcgtccctgccggcatccgcgacccaggcaactccgactccggccgcagctccggcgccg
gctcccgttgtcatgcttcctccccaagaatcttcttcgcccagtcgcgcgtctgcagcc
agcgcgcgcattgacgacacgccgccgtgggcagtggacgatgcgccggtgcgcacgcag
gccacaactgcgtccgacacgatggccgtgcttgcgcctgaagccgcgatggcttcgccg
tcgtccgcacccgtcgagctcgcacaacccgttgcgatcgcgtccgacgccgcagaggac
gctccggtttcggttgcaacatcttcgccggccgcgcttgtcgagccctcatcgtttgca
gagccagcagtggtcacgccaccagcaacggcagtatccgcagcagactcagcagccgat
gcatcggctttgctcgacgacggctgtatcgccgatgccgagcaatggctggagctggtc
acgcgcagtggcttgaatggaccgtcgcggcagctggccgccaacgccgcgtttatcggt
catcgcgatggcgtgctgcggctggcgctggcgccgggttttgaatatctccattccgag
cgctccatcgccaacctcgcgcaggcgttggcaccggtgttgggaaacacgccgcgcatc
gtcatcgaaaccggtagcgccgatgtcgaaaccttgcacgagcgtgccaaccgccagaaa
ggcgagcgccagagcgcggccgaaacagcctttatgaacgacccgacggtgcagctgctg
atccagcagcaaggcgcgcggatcgtccccgattccatccgcccttacgacgagtaa
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