Xanthomonas oryzae pv. oryzae PXO86: AZ54_20085
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Entry
AZ54_20085 CDS
T03765
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy00730
Thiamine metabolism
xoy01100
Metabolic pathways
xoy01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
AZ54_20085
Enzymes [BR:
xoy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
AZ54_20085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AJQ84606
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Position
complement(4140507..4142384)
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AA seq
625 aa
AA seq
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MNAAPTVLQQQAQSLSEAVTQPIPGSRKIFVQGSRADLQVPMREIALTRTPTLFGGEENP
PLSVYDTSGPYTDPQVAIDLAVGLAPLRAHWIAERGDTVALDGLSSSFGRGREHDARLDA
VRFPARRLPRVAREGANVTQMHYARRGIITPEMEYVAIRENQRLEAVTDASLRKQHPGEA
FGASIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI
AEEVEKLVWSIRWGGDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVDGRAEA
LTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHKE
NFLYTHFEDICQIMKAYDVAFSLGDGLRPGCIADANDAAQFGELETLGELTKLAWKHDVQ
TMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG
TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGAQVRDNALSKARFEFRW
DDQFHLGLDPEKAKEFHDETLPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGMDDA
QALSTGMQEKSAQFLAQGAQVYRPM
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgcgcctaccgttttgcagcaacaagcccagtcgttgtccgaggctgtcacc
caaccgattcccggttcacgcaagatcttcgtgcaaggctcgcgcgcggatctgcaggtg
ccgatgcgcgagatcgcgttgacgcgcacgcccaccttgttcggtggcgaagagaatccg
ccgctcagcgtctacgacacttccgggccttatacagatccgcaggtggctatcgatctg
gccgttggtctggcaccgctgcgcgcgcactggattgccgagcgcggcgacaccgtcgca
ctggatgggctgagctccagtttcgggcgtggccgcgagcacgatgcgcgtctggatgcc
gtgcgctttccggcgcggcgcttgccgcgggtcgcgcgcgagggcgccaacgtcacccag
atgcattacgcacgccgcggcatcatcacgccggaaatggagtacgtggcgatccgcgaa
aatcagcgtctggaagcggtgaccgatgcgagcttgcgtaagcagcatccgggcgaggcg
ttcggcgcctcgatccagcagcgcatcacgccggagttcgtacgcgaggagatcgcacgg
gggcgcgcgatcctgcccaacaacatcaatcatcctgaaagcgagccgatgatcatcggt
cgcaatttcctcaccaagatcaacgccaacatcggcaacagcgccgtgtcttcgggcatt
gccgaagaagtcgagaagctggtgtggtcgatccgctggggcggcgatacggtgatggat
ctgtccaccggcaagcacatccatgaaacgcgcgaatggatcatccgcaactcgccggtg
ccgatcggtacagtgccgatctatcaggcattggaaaaagtcgacggacgtgccgaggcg
ctgacctgggaaattttccgcgacaccttgatcgaacaggccgaacagggcgtggattac
ttcaccatccacgccggcgtactgttgcgctacgtaccgctgaccgcaaagcgggtgacc
ggcatcgtgtcgcgtggcggttctatcatggccaagtggtgcctggcgcatcacaaggaa
aattttctctatacgcacttcgaagacatctgccagatcatgaaggcctacgacgtggcg
ttctcgttgggcgatggcttacgccccggctgcattgccgacgcgaatgacgcggcccaa
ttcggcgagctggaaacgctgggcgagttgaccaaactggcgtggaagcacgatgtgcaa
accatgatcgaaggccccggtcatgtgccgatgcaattgatcaaggagaacatggacaag
cagctgcgcgaatgcggcgaggcgccgttttacaccctggggccgctgaccaccgacatc
gcgccgggctacgaccacatcaccagcgcgatcggtgcggcaatgatcggctggttcggc
acggcaatgctctgctatgtcactccgaaagagcatctgggtttgcccaatcggcaggac
gtgcgcgacggcatcatggcctacaagatcgccgcgcacgcagccgacctcgccaagggg
catccgggcgcgcaggtgcgcgacaacgccctgagcaaggcgcgtttcgagttccgttgg
gatgaccagttccatctcggtctggatccggaaaaggccaaggagttccacgacgagacg
ctgcccaaggacgcgcacaagctggcgcacttctgttcgatgtgcgggccgcatttctgc
tcgatgaagatcacacaggacgtacgcgattacgcggccgagcacggaatggacgacgcg
caagcgttatcgacaggaatgcaggagaagtcggcgcagtttctggcgcaaggtgcgcag
gtgtatcgccccatgtga
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