Xanthomonas oryzae pv. oryzae PXO86: AZ54_22095
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Entry
AZ54_22095 CDS
T03765
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoy03032
]
AZ54_22095
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_22095
Enzymes [BR:
xoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AZ54_22095
DNA replication proteins [BR:
xoy03032
]
Prokaryotic type
DNA Topoisomerases
AZ54_22095
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZ54_22095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AJQ84954
LinkDB
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Position
4539516..4542008
Genome browser
AA seq
830 aa
AA seq
DB search
MPKHLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPDNSFAMRYDLIEKN
EKHVEAIARAAKGADDIFLATDPDREGEAISWHIAEILKERGLLKDKPMQRVVFTEITPR
AIKEAMLKPRAIAADLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIDAHCRHPSQAFNARLIKLDGQKFEQFTVTDGDTAEAARLRIQQ
AAQGVLHVTDVASKERKRRPAPPFTTSTLQQEASRKLGFTTRKTMQVAQKLYEGVALGDE
GSVGLISYMRTDSVNLSQDALSEIRDVIARDYGTASLPDQPNAYTTKSKNAQEAHEAVRP
TSALRTPAQVARFLSDDERRLYELIWRRAVACQMIPATLNTVSVDLSAGSEHVFRASGTT
VVVPGFLAVYEEGKDTKSSEDEDEGRKLPLMKAGDNIPLDRIVTDQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLQFRKYVEMEGRSFRPTDVGRAVSKFLSGHFTRYVDYDF
TAKLEDDLDAVSRGEAEWIPLMEKFWGPFKELVEDKKDSLDKTDAGSVRVLGTDPVSGKE
VSARIGRFGPMVQIGSVEDEDKPTFASLRPGQSIYSISIEDALELFKMPRALGQDKDQDV
SVGIGRFGPFARRGSVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKDFEGSDIQV
LNGRFGPYISDGKLNGKIPRDREPASLTFEEVQQLLADTGKPVRKGFGAKKATLKKNAVK
DSAPKKPAAKKTATKTAASKTAAKKAPAKKAAAEKGTKRVVKKTVSKAAD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcacctgctcatcgtcgaatcgcccgccaaggccaagacgatcaataaatac
ctcggcaaggacttcaccgtcctggcctcgtatgggcacgtgcgcgacctggtccccaag
gaaggcgcggtcgatccggacaacagctttgcgatgcgttacgacctgatcgagaagaac
gagaagcatgtcgaagccatcgcgcgtgctgccaagggcgccgacgacatctttctggcg
accgacccggaccgcgagggcgaggcgatcagctggcacattgccgagatcctgaaagag
cggggcctgctcaaggacaagccgatgcagcgggtggtgtttaccgaaatcaccccgcgc
gcgatcaaggaagccatgctcaagccgcgcgcgatcgccgccgacctggtggatgcgcag
caggcgcgccgcgcgctggattatctggtcggcttcaacctgtcgccggtgctgtggcgc
aaggtgcagcgcgggttgtcggccggtcgcgtgcagtcgccggcgctgcgcatgatcgtg
gagcgcgaagaagagatcgaagccttcatcgcgcgcgaatactggtccatcgatgcgcat
tgccggcatccatcgcaggctttcaatgcacggctgatcaagctggacgggcagaaattc
gagcagttcaccgtcaccgacggcgacaccgcagaagcggcgcggctgcgcatccagcag
gccgcgcaaggcgtgctgcatgtgaccgatgtggccagcaaggagcgcaagcgtcgccct
gccccgccgttcaccacttccacgctgcagcaggaagcttcgcgcaagctcgggttcacc
acccgcaagaccatgcaggtggcgcagaagttgtacgaaggcgtggcgctgggcgacgaa
ggctcggtcggcctgatcagctatatgcgtaccgactcggtgaacctgtcgcaggacgcg
ctgtcggaaatccgcgacgtgatcgcgcgcgattacggcaccgcctcgctgccggaccag
cccaacgcctacaccaccaaatccaagaacgcgcaggaagcccacgaagcggtgcgcccg
acctcggcactgcgtacgccggcacaggtggcgcgcttcctgtccgacgacgagcgccgc
ctgtatgagttgatctggcgccgcgccgtggcctgccagatgattccggccacgctcaac
accgtcagcgtggatctgtcggccggaagcgagcacgtattccgcgccagcggcaccacg
gtggtggtccccggcttcctggccgtctatgaggaaggcaaggacaccaagagcagcgag
gacgaggacgaaggccgcaagttgccgctgatgaaggccggcgacaacatcccgctggac
cgcatcgtcaccgaccagcacttcacccagccgccgccgcgcttcaccgaagcggcgctg
gtcaaggcgctggaggaatacggcatcggccgtccctccacctacgcctcgatcatccag
accctgcagttccgcaagtacgtcgagatggaaggccgcagcttccgccccaccgacgtc
ggccgtgcggtatccaagttcctttccgggcatttcacccgctacgtggattacgacttc
accgccaagctcgaagacgacctggatgcggtctcgcgtggcgaggcagagtggatcccg
ttgatggagaagttctggggcccgttcaaggaactggtcgaggacaagaaggattcgctg
gacaagaccgacgccggcagcgtgcgcgtgctcggcaccgacccggtcagcggcaaggaa
gtcagcgcgcgcatcggccgcttcggcccgatggtgcagatcggcagcgtggaagacgaa
gataagcccacgtttgcgtcgctacgtccgggccagagcatctattcgatctcgatcgaa
gacgccctggaactgttcaagatgccgcgcgcactgggccaggacaaggaccaggatgtc
agcgtgggcatcggacgcttcggcccgtttgcgcgccgtggcagcgtgtatgcgtcgctg
aagaaggaagacgacccgtataccatcgacctggcgcgtgcggtgttcctgatcgaagag
aaggaagagattgcgcgcaaccgcgtgatcaaggacttcgaaggcagcgacatccaggtg
ctcaatggccgcttcggtccgtacatcagcgatggcaagctcaacggcaagatccccagg
gatcgcgagccggcgtcgctgacgttcgaagaagtgcagcagttgctggccgataccggc
aagccggtgcgcaagggctttggcgccaagaaggccacgctcaagaagaacgcggtcaag
gattcggcgccaaagaagcccgcagccaagaaaaccgcgaccaagacggcggccagcaag
accgctgcaaagaaggcgccggccaagaaagcggctgccgagaaaggaaccaagcgcgtg
gtcaagaagaccgtgagcaaggccgcagactaa
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