Xanthomonas oryzae pv. oryzae PXO86: AZ54_24095
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Entry
AZ54_24095 CDS
T03765
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xoy
Xanthomonas oryzae pv. oryzae PXO86
Pathway
xoy03420
Nucleotide excision repair
xoy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xoy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AZ54_24095
03430 Mismatch repair
AZ54_24095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoy03400
]
AZ54_24095
Enzymes [BR:
xoy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZ54_24095
DNA repair and recombination proteins [BR:
xoy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AZ54_24095
MMR (mismatch excision repair)
Other MMR factors
AZ54_24095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
AJQ85270
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All DBs
Position
4940857..4943043
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AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQALELDESKYPPKQLSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQD
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYMVERARQWVRDGGSYGELAVLYRSNAQ
SRALEEALISAQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLCTQQNTLAARARNALATFLSLVGQLHAETGEMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGMQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEERGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTAS
LGAARGGPVHGVVEAAPITLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGVKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatctaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctcgtcctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgcccaatcacggcatcttcgcggtg
accttcaccaacaaggccgccggcgaaatgcgccaccgcaccgacctgcagctgcgcaat
ggcagccgcgggatgtggatcggcaccttccatgggttggcccatcgcctgctgcgtctg
cattggcaggacgcgcggttgccggaaggcttccaggtcatggacagcgacgaccagttg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgagagcaagtatccgcccaag
caactgagctggtggatcaacgagcagaaggacgaaggccgccgtccgcagcatatccag
cccgagcccaacgacgattggaccgaggtgcgccgtcaggtgtatgcggcctaccaggac
cgctgcgaccgctccgggttgctggatttcgccgaattgctgctgcgcgcgcacgagttg
ctgcgcgacacgcccgcgttgctggcgcattaccgcgcgcgcttccgcgagattctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggtgaa
tcgggcaacgtgttcgtggtgggcgacgacgaccaggccatctatggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggatttccccggcgcgcagaccgtgcggctg
gagcagaactaccgctccagcgccaatatcctgggcgcggccaatgcggtgatcgcgcac
aacccggaccggatcggcaaacagctgtggaccgattccggcgatggcgacccgatcgat
ctgtatgcggcctataacgaagtcgacgaggcgcgctacatggtcgagcgcgcgcgccag
tgggtgcgcgacggcggtagttatggcgaattagccgtgctctaccgcagcaacgcgcaa
tcgcgcgcgctggaagaagcgctgatctccgcgcagttgccgtaccgcgtatatggcggc
atgcgcttcttcgaacgcgccgaaatcaaggacgcattggcgtatctgcgcctgctcacc
aaccgcagcgacgatgcggccttcgagcgcgcggtgaatacgcctacgcgcggcatcggc
gatcgcacgttggatgaagtgcgccggttggcgcgcgccaatgcgctgtcgttgtgggaa
gcggcgatgctgtgcacgcagcagaacacgctggccgcacgcgcacgcaacgcgttggcg
accttcctcagcctggtcggtcagctgcacgccgaaaccggcgagatggaactggccgaa
cgtatcgaccacgtgctgatgcgctcgggcctgcgcgaacattgggccaaggaaagccgc
ggcggactggattcggaatcgcgcaccgagaacctggacgaactggtctcggtcgcctcg
cgcttcacacgcccggacgatgaagacagccagggcatgacggagctggtcgccttcctc
gcttacgcatcgctggaagccggcgaaggccaggcgcaggccggcgaagaaggcatgcaa
ctgatgacgctgcattcggccaagggcctggagtttccgatcgtgtttttggtcggcctg
gaagacggcttgttcccgagcgcgcgctcgttggaagagagggggcggctggaagaagag
cgtcgcctggcgtacgtcggcatcacccgcgcgcggcagaagctggtgttgtgctacgcc
gaatcgcgccgcatccatggccaggacaactacaacgtgccgtcgcgctttctgcgcgaa
atcccgcgcgatctgctgcatgaagtgcgcccgaaggtgcaggtctcgcgcaccgcctcg
ctgggcgcggcacgcggcgggccggtgcatggtgtggtggaagcggcaccgatcacgctc
ggcgccaacgtcgaacaccccaagttcggcggcggcgtggtcgtggactacgaaggcgct
ggcgcgcatgcgcgcgtgcaggtgcagttcgatgaagtcggcgtcaagtggctggtgatg
gcttacgccaatctgacggttgtgtag
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