KEGG   Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_06960
Entry
BE73_06960        CDS       T03868                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xoz  Xanthomonas oryzae pv. oryzicola CFBP7342
Brite
KEGG Orthology (KO) [BR:xoz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xoz03400]
    BE73_06960
Enzymes [BR:xoz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     BE73_06960
    5.6.2.6  RNA 3'-5' helicase
     BE73_06960
DNA repair and recombination proteins [BR:xoz03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    BE73_06960
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: AJQ86867
LinkDB
Position
complement(1467315..1469816)
AA seq 833 aa
MSATRPPHGTPLQQWRAWFAQRGWAPLPFQRDVWKRYLDGESGLLHTPTGSGKTLAAFGG
PLLEALAARGCKSPRNPGKATSPARRQQQRNLQVLWITPLRALAADTARALREPVDALGL
DWQVGLRTGDASARDKRLARSGKLDVLVTTPESLALLLSYPDTAPQLSALRCVIVDEWHE
LLGNKRGVLLQLCLARLRGWTPQLRIWGLSATLGNLSQARDVLLPHRPNAALVSGVKPRT
MTLETLLPDSGERFPWAGHLGLAQLARVLQKIMQQRTSLVFTNTRAQAELWHQALSAVWP
DDLARLALHHGSLDPSLRAAAERGLADGSLRCVVATSSLDMGVDFPAVDQVLQVGSPKGI
ARLLQRAGRARHRPGESGHVVCVPSHALELVEYAAARRALVHGHIEARPPPRLSLDVLAQ
HCVTLALGGGFHADALFDEVRGTDAFAALEKPTWNAVLDFIVQGGSALAHYPDFHKVVRD
DDGMYRVIDRRVALRHRLSIGTITSDGSVRVQFLRGGRLGAVEEHFIGRLRRGDRFQFAG
RLLELVRLEDMTAYVRVAKGGSGVVPKWMGGRMPLSSALGREVEAVFADPGDAPEMQALA
PLLQLQASLSSLPAPDHLLVESIKARDGRHVFVYPFAGRQVNEGLAALLAARWGRRQRNT
FSFAANDYGFVLSPAQDVEIDADVLQTLLSPVNLFADLRDSLNLGELARRQFREIARVAG
LLSPSLPGRAPRSLRQLQASSGLLYDVLQRFDPDHLLLAQAEREVFEGQLELARLAHALE
DCARRALRLCKPRSLTPLSFPLWAERVRGQLSTEDWKARVLRAAEQLERKHGR
NT seq 2502 nt   +upstreamnt  +downstreamnt
gtgagtgccacgcggccgccgcatggcacgccattgcagcaatggcgtgcctggttcgcg
cagcgtggctgggcgccgctgccgtttcaacgcgatgtgtggaagcgctatctcgatggc
gaatccggcctgctgcacacgcccaccggcagcggcaagacgctggcggcatttggcggg
ccgttactggaggcattggccgcgcgtgggtgcaaatccccgcgcaacccgggcaaagcc
acctcacctgcgcgccgccagcaacaacgcaatctgcaagtgttgtggatcacgccattg
cgcgcactggccgccgacaccgcacgcgcactgcgcgagccggtggacgccttggggctg
gactggcaggtgggcctgcgcaccggcgatgccagcgcgcgcgacaagcgcctggcacgc
agcggcaagctcgatgtgctggtcaccacacccgaatcgctggccttgctgttgtcgtat
ccggataccgcgccgcagctgtcggcgctgcgctgcgtgatcgtcgacgagtggcacgaa
ctgctcggcaacaagcgcggtgtgctgctgcaattgtgtcttgcgcgcttgcgcggatgg
acgccgcagctacgcatctgggggctgtcggcaacgctgggcaatttatcgcaggcacgc
gatgtgctgttgccgcatcgccccaacgctgcgctggtctccggcgtcaaaccgcgcacg
atgaccctggaaaccttgttgccggacagtggcgagcgctttccctgggcgggccatctt
ggtctggcgcaactggcgcgcgtgctgcagaagatcatgcagcagcgcaccagcctggta
tttaccaatacccgcgcgcaggccgagttgtggcatcaggcattgagtgcggtgtggccg
gacgatctggccaggctcgcgctgcatcacggctcgctggatccatcgctacgcgccgcc
gccgaacgcgggttggccgatggcagcctgcgctgcgtggtggccacctccagcctggat
atgggcgtggacttccctgcagtggatcaggtgttgcaggtcggcagcccgaaaggcatt
gcgcgccttctgcaacgcgccgggcgcgcgcgccatcgccccggcgaatccggccacgtg
gtgtgcgtaccctcgcatgcgctggaattggtcgaatatgccgcggcacgccgcgcgctg
gtgcatggccatatcgaagcgcgtccaccgccgcggttatcgctggacgtgctggcacaa
cattgcgtcaccctcgccctcggcggtggcttccatgccgatgcgttgttcgacgaagtg
cgcggtaccgatgccttcgctgcgctggaaaaacccacctggaacgcggtgctggatttc
atcgtgcaaggtggcagcgcattggcgcattacccggatttccacaaggtggttcgcgac
gacgacggcatgtaccgcgtgatcgaccggcgcgtcgcgctccggcatcggctgtccatc
ggcacgatcaccagcgacggcagcgtgcgcgtgcagttcctgcgcggcgggcggctgggc
gcggtggaagaacacttcatcggccgcctgcgccgcggcgatcgcttccagttcgccggc
cgcttgctggagctggtgcgcctggaagacatgaccgcctacgtacgcgtggccaagggc
ggcagtggcgtggtgccgaaatggatgggcggacgcatgccgttgtcgtcggcactgggc
cgcgaggtggaagcggtgttcgccgaccccggcgacgcgccggagatgcaggccttggcg
ccattgctgcagctgcaggcctcgctctcatcgttgcctgcgccggatcatctgctggtg
gaaagcatcaaggcgcgcgatggccggcatgtgttcgtgtacccgttcgccggccggcag
gtcaacgaaggcctggccgcgttgctcgcggcgcgttggggccgacgccagcgcaatacg
tttagctttgcggctaacgactatggctttgtgctgtcgccggcgcaggatgtcgagatc
gatgccgatgtgctgcagaccctgttgtcgccggtgaacctgttcgccgatctgcgcgac
agcctcaatctgggcgagctggcgcgccggcaatttcgcgagatcgcgcgcgtggccgga
ctgttgtcgccctcgttgcctgggcgggcgccgcgcagcctgcggcagctgcaggcctcc
agcggcttgctgtacgacgtgttacagcgtttcgacccggatcacttgctgcttgcgcaa
gccgaacgcgaggtgttcgaaggccagctcgagctcgcgcggcttgcgcatgcgctggaa
gattgcgcgcgccgcgcgttgcgcctgtgcaaaccgcgcagcctcactccgttgtcgttt
ccgctctgggccgaacgcgtgcgcgggcaactgagtaccgaagactggaaggcgcgcgtc
ttgcgcgctgccgaacaactggagcgcaagcatgggcgatag

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