Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_07325
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Entry
BE73_07325 CDS
T03868
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Pathway
xoz03030
DNA replication
xoz03430
Mismatch repair
xoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BE73_07325
03430 Mismatch repair
BE73_07325
03440 Homologous recombination
BE73_07325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoz03032
]
BE73_07325
03400 DNA repair and recombination proteins [BR:
xoz03400
]
BE73_07325
Enzymes [BR:
xoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BE73_07325
DNA replication proteins [BR:
xoz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BE73_07325
DNA repair and recombination proteins [BR:
xoz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BE73_07325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AJQ86927
LinkDB
All DBs
Position
complement(1537645..1541235)
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVEIDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFSEGRADLAEQQLADWQRVFGDGLHL
ELTRTGREGEERFNQFALNAAGVRGLPVVASNDARFLYASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPEDET
LDSWIRSQSRDGLAARLEKSPIAPGKTRQDYVDRLEFELDTIINMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFTYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPEPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITTIPLDDVPTYKGVFASGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTAKLNRRTLEAMINA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSASAMRLDLPESKEWP
LGQLLTSERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGGGGGGGDGEKR
AWRPEVSAILAGQVIGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIV
KGGLREDEFNGGYSLRIRQCWDYEQICADHAQRLSLRLDLREKQAFKRIDALLAKHRPGK
TPLRLDLLLRAQSGGVAGMLDLNGSHSVRIDQQLMDSLRADPAVRTLKIKYSPPWA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
actatccgtgtgcccgagaaaccggatcaggctgacccgaaaaaggccaagcaggccaac
ctgctgagccgggccgtcgaaatcgacatgcccgcgttggcggtcaccgacctcaacaac
ctgttcgcgctggtcaagttctacaaggccgccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacgtgatgatcgccacgccggacatgacgccctggcgcatgaccctgctgtgc
cgcgaccgcgagggctacctgagcctgtcgcggctgctcacccgcgcctggatggaaggc
caccgcccggaaggcggcgtggcgatccatccggaatggctgcaggccggccacgccaac
ctgtttgcgctggccggccgcgacagcctggccgggcggttgttcagcgaaggccgcgcc
gacctggccgagcaacaactggccgactggcagcgcgtgttcggcgacggcctgcacctg
gaactcacccgcaccggtcgcgagggcgaagaacgcttcaaccagttcgcgctcaacgca
gcgggcgtacgcggcctgccggtcgtggccagcaatgacgcgcggtttttatatgcaagc
gacttcaacgcacacgaagcgcgcgtgtgcatttcctcgggccgcgtgctcgacgacccc
aagcgcccgcgcgactacagcgaccagcagtacctgaaatccagcgaggagatggcggca
ttgttcgccgacatccccgacgcgatcgacaacacccacgcgctggcgcaacgctgcaac
atcgagatgcgcctgggcacctacttcctgcccgcctatccggtgccggaagacgaaacg
ctggacagctggatccgcagccagtcgcgcgacggtctggccgcacgtctggaaaaaagc
ccgattgcaccaggcaagacgcgccaggactacgtggaccggctcgaattcgagctggac
accatcatcaacatgggcttccccggctactttctgatcgtggccgacttcatccagtgg
ggcaagaatcagggcattccgatcggcccagggcgtggctccggtgccggctcgctggtg
gcctgggcgctgcagatcaccgatctggacccgctgccgtacaacctgctgttcgagcgc
ttcttgaaccccgagcgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaagtcatcgactacgtggcacgcaagtacggccgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgatgccgggcgcgtactcggt
ttcacctatggtctggtcgacagcgtcgccaagctgatccccaacatcctgggcatcacg
ctcaaggatgcgatgggcgaaggcaaggattcggagatggcctcgccggagctgatccag
cgctaccaggtcgaagacgacgtgcgcgacctgatggacctggcgcgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgcccgagccgctgagc
gaattctgcccgctgttcgccgaacacgacgaagacggccgcggcaagaatccggtcacc
cagttcgacaaggacgacgtcgaagcggtgggcctggtgaagttcgacttcctcggcctg
cgcacgctgaccatcatcgattgggcggtcaaggcgatcaacgtgcgccacgcacgcgcc
ggcatcgacccggtcgacatcaccaccattccgctcgacgacgtgcccacctacaagggc
gtgttcgcctcgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgccgc
ctgctcaaggacgcgcgcccggaccgcttcgaagacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgatcccggacttcaacgcgcgcaagcatggccagcaggag
atcgtctaccccgacccgcgcaccgaagtcatcctgaaagacacctacggcatcatggtg
tatcaggagcaggtgatgcagatggcgcagatcgtcggcgattactcgctgggcggcgcc
gacctgctgcgtcgcgcgatgggcaagaaggtgccggccgaaatggccaagcaccgcgaa
atcttccgcgagggtgccgccaagggcggcgtgagcgcggccaaggccgacgaaatcttc
gacctgatggagaagttcgccggctacggcttcaacaagtcgcacgccgccgcctatgcg
ctggtcagctaccagaccgcgtggctgaaacggcattacccggccgaattcatggccgcg
acgctgtcctcggacatggacaacaccgacaaggtggtcggctttctcgatgaggtacgc
aacctcggcctcaccgtcaagccgccacgcgtcaacgaatcggcctacatgttcgaggcg
gccagcccggacaccattcaatacggcctgggcgcgatcaagggcgtcggccagggcgcg
tgcgaggcgatcgtcgaagaacgccagcgcggtggtccctacaccacgctgctggatttc
tgcacgcgcgtgggcaccgccaagctcaatcggcgcacgctggaagcgatgatcaatgcc
ggcgcgatggatgggctgggcaagaaccgcgcttcgctgatgctgcagttgcccgaagtg
atgaaggccaccgagcagatggcgcgcgaacgcgcctcggggcagaactcgctgtttggc
ggtccggacccgagcgcgtcggcaatgcgcctggacctgcccgaaagcaaggaatggccg
ctgggccagctgctcaccagcgagcgcgaaacgctgggcttctacctcagcggccacccg
ttcgacccgcaccgcgaagaagtgcgcgagctggtcggctgcgacctgggcgcgctggaa
aagatcctcgcgtcgcaacaacgtggcggcggtgggggcggcggcgatggcgaaaaacgc
gcctggcgtcctgaagtaagcgccattcttgccggccaggtgatcggcgtgcgccgcaag
ggcgacagccaggtgttcgtgcaattggaagacggccgtggccgggtcgaatgcagcgcg
ttctccgatgcgatggccgagttcggccacctgctgacccgcgaccgcatcctgatcgtc
aagggcggcctgcgcgaggacgaattcaacggcggctacagcctgcgcatccgccagtgc
tgggactacgagcagatctgcgccgaccacgcgcagcgcctgtcgctgcgtctggatctg
cgcgaaaaacaggccttcaagcgcatcgacgcgctgctggccaagcaccgccccggcaag
acccccttgcgcctggacctgttgctacgtgcccagagcggtggcgtggccggcatgctc
gacctcaacggcagccactcggtgcgcatcgaccagcagctcatggacagcctacgcgcc
gaccccgcggtgcggacgttgaagatcaagtacagcccaccgtgggcgtga
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