Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_09900
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Entry
BE73_09900 CDS
T03868
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xoz03016
]
BE73_09900
Enzymes [BR:
xoz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
BE73_09900
Transfer RNA biogenesis [BR:
xoz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
BE73_09900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AJQ87361
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All DBs
Position
complement(2071996..2073087)
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AA seq
363 aa
AA seq
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MPHWITHPSELTDRLQAARPARIGLDTEFIRERTYWPQLALVQMAIGEEILLIDPLIPGM
NAALKEWLTATDIVKVMHSASEDLVTFKCACGVLPRPLFDTQIAAALAGVGGGMGYQKLV
QEVTGTLLTKGETRSDWMRRPLSPSQLEYAADDVRYLFAIHDELTRRLTEQNRLGWLAED
AERLLATVEHDDGERWPHVSLRTAQFLEPAAQRRLLRLLRWRDLQARQSDRPRSWILDNE
LASQLARFPPADLDALLQQFDKFPKAPRKLANAVWDALNTPLPDEEHAPLAQAATDGNKA
VLKRLQDTVAQRSRELGLPDGLLASRRHLETLIEQRSWPAALGQWRRAVLEAQVMPLLEA
SEA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgccccattggattacccacccctccgagctgaccgaccgcctgcaggcagcgcgccca
gcgcgcattggcctggataccgaattcattcgcgaacgcacctattggccgcaactggcg
ctggtgcagatggccatcggcgaggagatcctgctgatcgatccgctgatccccggcatg
aacgcggcgctcaaggagtggttgaccgccaccgacatcgtcaaggtgatgcatagcgcc
agcgaagacctggtcaccttcaaatgcgcgtgcggggtattgccgcggccgttgttcgac
acccagatcgccgcggcgctggccggtgtcggcggtggcatgggctaccagaaactggtg
caggaagtgaccggcaccttgctcaccaagggcgaaacacgctcggactggatgcgtcgc
ccgctatcgccgtcgcagctggagtacgccgccgacgacgtgcggtacctgtttgcgatc
cacgacgaactcacccgtcgcctcaccgaacagaaccgcctgggctggctggccgaagat
gccgagcgcctgctggccacggtggagcacgacgatggcgaacgctggccgcatgtgagc
ctgcgcaccgcgcaattcctggaaccggcggcgcaacgacggttgctgcgcctgctgcgt
tggcgcgatctgcaggcgcgtcaaagcgatcgcccgcgcagctggattctggacaacgaa
ctggccagccagctggcgcggtttccacccgccgatctggacgccttgctgcagcagttc
gataaatttcccaaagcgccgcgcaagctcgccaatgcggtgtgggacgcgctcaacacg
ccattgcccgatgaagaacatgcgccattggcgcaagccgcgaccgacggcaacaaggcc
gtgctcaagcgcctacaggacaccgtggcgcagcgtagccgcgaacttggcttgccggat
ggtctgctggcctcgcgccggcacctggaaaccttgatcgaacagcgcagctggcccgca
gcgctgggccaatggcggcgcgcggtactggaagcgcaggtgatgccgctgctggaagca
tccgaagcgtaa
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