Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_13025
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Entry
BE73_13025 CDS
T03868
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoz03032
]
BE73_13025
03036 Chromosome and associated proteins [BR:
xoz03036
]
BE73_13025
03400 DNA repair and recombination proteins [BR:
xoz03400
]
BE73_13025
DNA replication proteins [BR:
xoz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BE73_13025
Chromosome and associated proteins [BR:
xoz03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
BE73_13025
DNA repair and recombination proteins [BR:
xoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
BE73_13025
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
HU-CCDC81_euk_2
PTS-HPr
VWA_3
Motif
Other DBs
NCBI-ProteinID:
AJQ87875
LinkDB
All DBs
Position
complement(2755691..2756002)
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AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDMSDTTD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gacgtagatctggcagtcaagtcgctgctagaaatgatggggcaggcgctctccgatggt
gatcggatcgaaattcgcgggttcggcagtttttcgctgcattaccgtccgccacgtcta
gggcgtaatcccaagaccggcgaatcggtcgcattgccgggcaagcatgttccgcacttc
aagccgggcaaggaattgcgtgagcgcgtcagctccgtggtgcctgtcgatatgtccgat
acgacggactga
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