Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_20360
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Entry
BE73_20360 CDS
T03868
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Pathway
xoz00260
Glycine, serine and threonine metabolism
xoz00460
Cyanoamino acid metabolism
xoz00630
Glyoxylate and dicarboxylate metabolism
xoz00670
One carbon pool by folate
xoz00680
Methane metabolism
xoz01100
Metabolic pathways
xoz01110
Biosynthesis of secondary metabolites
xoz01120
Microbial metabolism in diverse environments
xoz01200
Carbon metabolism
xoz01230
Biosynthesis of amino acids
xoz01240
Biosynthesis of cofactors
xoz04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BE73_20360 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BE73_20360 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BE73_20360 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BE73_20360 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BE73_20360 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BE73_20360 (glyA)
Enzymes [BR:
xoz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BE73_20360 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AJQ89130
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Position
complement(4268437..4269690)
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AA seq
417 aa
AA seq
DB search
MFSRDVRLETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYP
GKRYYGGCAFVDIAEQLAIDRIKQVFDADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKANVSGKLFNAVQYGVNEQGLIDYDEVQRLATEHTPKMVVAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYKEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgatgtccgactggaaacctacgaccccgaactggccaaggccatcgct
gctgaagccggccgccaggaggatcacgtcgagctgatcgccagcgagaactactgcagc
ccgctggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctaccct
ggcaagcgctactacggcggctgcgcgttcgtcgacattgccgaacagctggcgatcgac
cgcatcaagcaggtcttcgatgccgattatgcaaatgtgcagccgcacagcggctcgcag
gccaaccaggcggtgtatctggcgctgctgcagccgggcgacaccattttgggcatgagc
ctggcgcatggcggccacctgacccacggtgccaaggccaacgtctccggcaagctgttc
aacgcggtgcagtacggcgtcaacgagcagggcctgatcgattacgacgaagtgcagcgt
cttgcgaccgagcacacgccgaagatggtggtggccggtttctcggcgtattcgcagaag
atcgactgggcccgcttccgtgccattgccgacagcgttggcgcctatctgttcgtggac
atggcccacatcgctggcctcgtggccgccggggtgtatcccagcccgatggaacatgcg
cacgtggtgacgtcgacgacgcacaagacgctgcgcggtccgcgtggcggcatcatcgtc
gccaagggcgccagcgaagaattgcagaagaagctgcagtcgatcgtgttccccggcatt
cagggcggcccgctgatgcacgtgatcgccgccaaggcggttgcgttcaaggaagcactg
gagccggcgttcaagacctaccagcaacaggtggtcaagaatgcgcaggcgatggccaac
acgctgatcgcgcgcgggtacaagatcgtctccggcggcaccgaaaaccatctgatgctg
gtcgacatgatcggccgcgacgtctccggcaaggatgccgaagccgcgctgggcaaggcg
cacatcaccgtcaacaagaacgcggtgcccaacgacccgcgctcgccgttcgttacctcg
ggtctgcgcttgggtaccccggcaatcaccacgcgcggttacaaggaacaggacagcatc
gatctggccaactggatcgccgatgtgctcgacgccccgaccgacgaagcggtgctggcg
aaagtgcgcgatgcagtgaccgcgcagtgcaagcgttatccggtgtacggctga
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