Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_21395
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Entry
BE73_21395 CDS
T03868
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xoz03021
]
BE73_21395
Transcription machinery [BR:
xoz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BE73_21395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
KORA
HTH_11
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AJQ89300
LinkDB
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Position
complement(4501864..4502739)
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AA seq
291 aa
AA seq
DB search
MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
TRSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacttcgactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagattccggtgctgtcggtcgatgag
gagcagaatctggcccgccgcttccgcgacgagctggatctggacgccgcgcgcgaactg
gtccattcccacctgcgcttcgtggtgcatgtggcccgcggctataacggctacggcctg
ccgctgggcgacctgatccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttc
gacccggacatgggcgtgcgtttggtcagcttcgcggtgcactggatccgtgccgaaatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccacgaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtccaagacccgtctgggctggctcaatgcgtcggaa
gtgactgcggtcgccaaggacttgaacgtctccgagcgtgaagtgatggagatggagtcg
cgtctgtccggtcgcgacatcggtttcgacgcctcgtccgacgaagacgacgatcacggc
ccgccgtcgccggtgagctacctggtcgccaacgaagaagacccgtcgcaggcctacgag
cgccacgacagcgaagacaaccagttgcagttgctgcgcgaaggcatggccggtctggat
acgcgttcgcgcgacatcgtcaagcgtcgctggctggattcggattccaaggtgacgctg
caggagctggccgatgagtacggcgtgtcggccgagcgtatccgccagatcgaggcgaat
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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