Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_22385
Help
Entry
BE73_22385 CDS
T03868
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Pathway
xoz03030
DNA replication
xoz03410
Base excision repair
xoz03420
Nucleotide excision repair
xoz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BE73_22385
03410 Base excision repair
BE73_22385
03420 Nucleotide excision repair
BE73_22385
03440 Homologous recombination
BE73_22385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoz03032
]
BE73_22385
03400 DNA repair and recombination proteins [BR:
xoz03400
]
BE73_22385
Enzymes [BR:
xoz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BE73_22385
DNA replication proteins [BR:
xoz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BE73_22385
DNA repair and recombination proteins [BR:
xoz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BE73_22385
NER (nucleotide excision repair)
GGR (global genome repair) factors
BE73_22385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Glyco_hydro_32C
Motif
Other DBs
NCBI-ProteinID:
AJQ89454
LinkDB
All DBs
Position
complement(4700205..4703006)
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDALYADYKANRPSMADDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVGKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNTETLAVLYARYGFTQALRELGGASVQSGLLSEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVELDPALSAPGAYETILTQEQLDSWIAQLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGKAAYLPFGHNFPGAPVQLDRTHALAQLAPLLTDPAVR
KVGQHGKYDLHVMRRHGVELAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLDDATRYAAEDADITLRLHHVLGPKLAAEPGLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRTFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPPGRKLIACDYSQIELRIMA
HLSGDPGLVGAFASGTDVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVKVDGWIADHAQRAKMILQVHDELVFEADVDFVDT
LLSEVTTRMASAAELRVPLVVDSGVGDDWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgtgcgttccacgcgctt
ccgccgctgaccaatgcgcagggcgaacccaccggtgccttgttcggcgtggtcaacatg
ctgcgcgccaccttgaaggaacgtccggcctacatcgccttcgtggtggatgcacccggc
aagaccttccgtgacgccttgtatgccgactacaaggccaaccggccgtcgatggccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgacggcgtggaagccgacgatgtgatcggcacgctggcgctgcaggccgct
gccgatgggttgagcgtgaccatctccaccggcgacaaggacttcgcccagctggtgcgc
ccgggtatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgaccagatcgtcgacctgctggcactgatgggcgac
accgtcgacaacgtacccggcgtgggaaagtgcggtcccaagactgccgccaaatggctg
gccgaatacgattcgctggacggcgtcatcgccaatgccgacaagatcaagggcaagatc
ggcgacaacctgcgcgctgcgttgccacgcctgccgctcaaccgtgagctggtcaccatc
aagaccgatgtgaccctggccagcggcccgcgcgcgctggatctgcgcgaacccaacacc
gaaacgctagcggtactgtacgcgcgctacgggttcacccaggcgctgcgcgagttgggc
ggcgcgtcggtgcagtccggtctgttgtccgagccggtggcgctgggcgctgccgctgct
accgcgcgcaccgagccgggccgtgcgcgcggcaccggcttcgtgtccgggccggtcaac
gcagcggtggagctggatccagcgctgtctgcgcccggcgcgtacgagaccatcctgacc
caggagcagctggacagctggatcgcgcagctgcgcgccgccggccagttcgcgttcgat
accgaaaccgacagcctggacccgctgcaggccgacctgatcggcctgagcgtggccgcc
gagcccggtaaggcggcgtatttgccgttcggccacaactttcccggtgccccggttcag
ctcgaccgcacccacgcgctggcgcaactggcgccgctgctcaccgacccggccgtgcgc
aaagtcggccaacacggcaagtacgacctgcacgtgatgcgccggcatggcgtggagctt
gccggctacgccgacgacacactgctggagagcttcgtgctcaattccggcagcgcccgt
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtttgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggacgatgccacc
cgctacgccgccgaagacgccgacatcaccctgcgcctgcatcacgtgctcggccccaag
ctggcagccgagcctggcctggagcgcgtctaccgcgacatcgaaatgcccctggtggac
gtgctggcgcgcatcgaagccaacggcgtgtgcgtggacgccgccgaactacgccgtcag
agcgcggacctgtccaagcgtatgctcgccgcccagcaaaaagccaccgagctggcaggg
cgcaccttcaacctggattcgcccaagcagctgcaggcgctgttgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaagcgctggaa
gccatcgccgaccagcacgagctgccgcgggtgatcctggaataccgcggcctgaccaag
ctgcgcagtacctacaccgacaagctgccggagatgatccacccgcagtccggacgcgtg
cacaccagctaccaccaggccggcgccgccaccgggcggctgtcttcatcggacccgaac
ctgcagaacatcccgatccgcaccgaagacggccgccgcatccgccgcgctttcgtcgcc
ccgcccgggcgcaagctgatcgcctgcgactactcgcagatcgagctgcgcatcatggcc
cacctgtccggcgaccccggcctggtcggcgcgttcgcgtccggcaccgacgtgcaccgc
gccactgccgccgaagtattcggccgcaccatcgacaccgtcagcggtgacgagcgccgc
gctgccaaggcgatcaacttcggcctgatgtacggcatgagcgcgttcggtctggcccgc
cagctcggcatcggccgtggcgaagcgcaggactacatcgcgctgtacttcagccgctat
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaaccgtgttcggccgccgcctgtatctggatttcatcaatgccggcagccagggccag
cgtgcaggcgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgccgacatc
atcaagcgcgccatggtcaaggtggacggctggatcgccgaccacgcgcaacgcgccaaa
atgatcctgcaggtgcacgacgaactggtgttcgaagccgatgtcgatttcgtcgacaca
ctgctcagcgaagtcaccacgcgcatggcctccgcagctgaattgcgcgtgccgttggtg
gtggattcgggcgtgggcgatgactgggatcaggcgcactga
DBGET
integrated database retrieval system
