Xanthomonas oryzae pv. oryzicola CFBP7342: BE73_23725
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Entry
BE73_23725 CDS
T03868
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xoz
Xanthomonas oryzae pv. oryzicola CFBP7342
Brite
KEGG Orthology (KO) [BR:
xoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoz03032
]
BE73_23725
03400 DNA repair and recombination proteins [BR:
xoz03400
]
BE73_23725
Enzymes [BR:
xoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BE73_23725
DNA replication proteins [BR:
xoz03032
]
Prokaryotic type
DNA Topoisomerases
BE73_23725
DNA repair and recombination proteins [BR:
xoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BE73_23725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AJQ89663
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Position
5000079..5001356
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AA seq
425 aa
AA seq
DB search
MACAHGVVVALTWPSLAALNNRGQSLDLCTMKAKRVLRNAAVTASTAGKLAAVATGAAVA
PAAVASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIGDADTLHRI
RSLAIPPAYTEVWICAKPNGHLQATGRDARRRKQYRYHADWAQVRGEGKFERVIAFGTAL
PKLRRRLRRDLVLPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEF
LKGGRARLRFRGKSGQDQDIEVDDKQLVTLIRQCQQLPGQSLFQYHDDDGQLQPVDSGEV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALTQVQNDVIREVADALG
NTPSVCRKAYIDPCVFEGWRAGQLQAMAAGVRGERQWEAATLKFLTASRSKLKAQATPAS
KRKSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgcacacggcgttgtcgttgcgttgacgtggcctagtctcgctgcgctcaac
aatcgtggccagtccttggacctgtgcacaatgaaagccaaacgtgttcttcgcaatgcc
gcagtcaccgccagtaccgccggaaagcttgctgcggtggccactggtgccgctgtggcc
ccggccgccgtggcaagcgcggccgccgtggcgcaggccaaggctaccgcacgcgcggcc
gggctgacgtacgtcaacgaccagcagcccggtatcagccgccgcaaagccggcaagagc
ttcagttaccgcgatgccgacggacaacgcatcggcgatgccgacaccttgcaccgcatc
cgttcgctggccattccgccggcgtataccgaggtgtggatctgcgccaagcccaatggg
catctgcaggccaccggacgcgacgcacggcggcgcaagcagtaccggtatcacgccgat
tgggcgcaggtgcgtggcgaaggcaagttcgaacgcgtgatcgccttcggtacagcgctg
cccaagctgcggcggcggttgcgtcgcgacctggtgctgccaggatttccgcgcgagaag
gtgttggcgatcgtggtggcattgctggccgacaccctggtgcgtgtgggcaatgccgaa
tatgcgcgcagcaatcgttcgtacgggctgaccacgctgcgcaaccggcatatggaattt
ctgaagggcggccgcgcgcgactcagattccgcggcaaaagcggccaggaccaggacatc
gaagtggacgacaagcaactggtcacactgattcgccaatgccagcaattgccggggcaa
tcgttgttccagtaccacgacgacgatggccagttgcagccggtggattcgggcgaggtc
aacgactatctgcgcgaggcgatgggcgaagacttcaccgccaaggatttccgcacctgg
ggcggcaccttggccgcattgcagcggctggcgcgcttaccgttacccgaacgcagcagc
gaacgcgcgctgacccaggtgcaaaacgatgtcatccgcgaagtggccgacgccttgggc
aacacgccctcggtatgccgcaaggcctacatcgacccgtgcgtgttcgaaggttggcgt
gcgggccagctccaagcgatggccgccggtgtgcgcggcgagcgccaatgggaagcagcc
acgctgaagttcctgaccgcctcgcgcagtaagctcaaggcacaggcaacgccggcgtcg
aagcggaagtccgcatag
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