Xanthomonas perforans: BJD13_00020
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Entry
BJD13_00020 CDS
T04778
Name
(GenBank) hypothetical protein
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03030
DNA replication
xpe03430
Mismatch repair
xpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJD13_00020
03430 Mismatch repair
BJD13_00020
03440 Homologous recombination
BJD13_00020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpe03032
]
BJD13_00020
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_00020
Enzymes [BR:
xpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJD13_00020
DNA replication proteins [BR:
xpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BJD13_00020
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BJD13_00020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
APO97622
LinkDB
All DBs
Position
pLH3.1:1465..2589
Genome browser
AA seq
374 aa
AA seq
DB search
MHITTTREDLLAAIAPLMSVAQRRTKSRNGHANLTIRAGEGTQIHFNTSDENSDICTAST
ATIRERGEIGVSAKRLSDIMRSFASGSLVEMQRKGNFLNIKLDGSRFSINCDGPLAPVTR
QAAKTGQTTGKFDLAADEFKYLLDAACSGVAGLGSDSKLPQGVLFHLTGDRLRLVGTDGG
RMAVASTSINTLQAEKLVLGHNSVADIRTLLSKARSDEQIGFSWGSGMAHIKTTYADLHV
GVLANTYVDYERIMAANTVNPFHVGLADLREILTRTLILSTAVTVKLTGRTLSFITADQA
SRSQGQESIESIELPADARRVNDFAISVNAQYLLDALNAVRGESVHLSVSKPDTPLIVLA
NGGDARVYVMPVRI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaccaccacccgtgaagacctcctcgcggcgattgcacccctcatgtcggta
gctcagcgcagaacgaagtcccgtaacggacacgcgaacctgacaatccgtgctggtgaa
ggcacacagatccacttcaatacatcagacgaaaactcggacatctgcaccgcctcgact
gccactattcgtgagcgtggggaaattggtgtctctgccaagcgactgagcgacatcatg
cgaagcttcgcatccggttctctggtcgaaatgcaacgcaagggcaacttcctcaacatc
aaacttgacggaagccggttctccatcaactgcgacggcccgctcgcaccggtgacacgc
caagccgccaagacaggccaaacgactggcaagttcgaccttgccgccgatgagttcaag
taccttcttgatgctgcttgttcaggcgtcgcgggtctcggtagcgattccaagcttccg
caaggcgtgctgttccacctgaccggggaccgcctgcgactcgtaggcactgacggcgga
cgcatggccgtcgccagcaccagcatcaatactctgcaagcagaaaagctggtgcttgga
cacaattcggtggctgacatccgcactttgctttccaaagcaagaagcgatgagcagatc
ggcttcagctggggcagcggtatggcacacatcaagactacttacgccgatctccatgtg
ggtgtcttggccaacacctacgtcgattacgagcgcatcatggcagccaacacggtcaac
ccgtttcatgtcggactggcggacctgcgcgaaattctgacgcgcaccctcattctcagt
acggcggtaactgtcaagctcaccggccgaacattgagcttcatcaccgcagaccaggcc
agcaggagccaggggcaggagagcatcgagagcattgagctaccagctgacgcgcgtcgc
gttaatgacttcgccatcagcgtcaacgcccagtatcttctggatgcgctcaacgccgtg
cgcggtgaatctgtgcatctttcggtaagcaagccagatacccctttgatcgtattggca
aacggaggcgatgcaagggtctacgttatgccggtccgcatttaa
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