Xanthomonas perforans: BJD13_00130
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Entry
BJD13_00130 CDS
T04778
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03420
Nucleotide excision repair
xpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJD13_00130
03430 Mismatch repair
BJD13_00130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_00130
Enzymes [BR:
xpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD13_00130
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD13_00130
MMR (mismatch excision repair)
Other MMR factors
BJD13_00130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_22
DEAD
Motif
Other DBs
NCBI-ProteinID:
APO97644
LinkDB
All DBs
Position
pLH3.1:complement(24112..25866)
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AA seq
584 aa
AA seq
DB search
MLNPGQQQAVRASGHAMICACPGSGKTTVLKFRASHLLELDPASRLLAVTFTSAAAGELE
ERIRSQNPKLGDRLVCGTFHSLAKRQLERSGKRVNLKAQAAGAIMRSAYSEVVTQTNIYP
FDEIASKVEYFKTHIDHSFGSPQNQMAEEVYLRYRELMAERGFHDFSDLLLLATRGMAKG
AGHPDFVVPYKVDYMLADEFQDTDDIQFKWIAEHIKHGAKVTVVGDDDQSIFGFRFAGGY
KCMTEFQQLTDAQVVNLDTTYRCAAEILAPASKLIAYNAERLHKNLVTENKAHGQVRVLR
FPDRGAENTALTAAILDNGDYGNWAVLARTNSQLEKVEQILQESGIPSTRSGRTPFWELE
VPALFLSVLKSLAAGDMAGFDQLLRRGGVDESDLTRITSRVMASRPGALQRFLNEPDESD
SPMVKRLASVVPTWVEMAKDPSRVDRVFLGLNMFMSRNMYGAQASRATIERNNRLLASCE
GSIARLSGTLKQRLQHIQRQAEGTDEDSDAVRLMTLHASKGLEFKHVWIVGCEQGVIPSN
QSPVEEERRLFYVGMTRAKLNLFLSYQRNSDAQPSEFLAEAGLI
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaccctgggcagcagcaagcagtccgggcctcggggcacgccatgatttgtgcg
tgccccggttcgggcaagacgacggtcctcaagttccgggcgtcccatttgctcgagctc
gacccggccagtcgtctacttgccgtgacattcacctccgccgccgccggcgaattggag
gagcgcatccgatcgcagaatcccaaactaggggatcgactggtgtgcggcacctttcac
agcctggctaagcggcaactcgaacgatctggaaagcgcgtcaatcttaaagcgcaggcc
gctggcgccatcatgcgatccgcctattccgaggtggtgacgcagaccaacatctatccc
ttcgatgagatcgcctcgaaggtcgaatacttcaaaacccacatcgatcactcttttggt
tcaccacagaatcagatggctgaggaggtctacctccgctaccgcgaactgatggccgaa
cgtggcttccacgacttctcggatctgctgctgctcgctacgcgcggcatggccaagggt
gctggccaccccgatttcgttgtgccgtacaaagttgactacatgctcgctgacgagttc
caggacacggatgacatccagttcaagtggatcgccgagcacatcaagcacggcgccaag
gtcacggtcgttggcgacgacgatcagtccatctttggcttccgattcgctggcggctac
aaatgcatgaccgagttccagcagctaactgatgcccaggtggtgaatctagacacgact
taccgctgtgcagccgagatcctcgcgccggcgtccaaactcatcgcctacaacgcggag
cgcctgcacaaaaacttggtcaccgaaaacaaggcacatggacaggtccgcgtgcttcgc
tttcctgatcgtggcgccgagaacacggcgctcactgctgccattctggacaatggcgac
tacggcaactgggcagtgctggcccgaaccaacagccagctggagaaggtggagcagatc
ctgcaggagagcggaatcccttccacacggtccgggcgcacgccattctgggaactggaa
gtccctgccctgttcctatcagtgcttaaatcacttgccgctggcgacatggccggcttt
gaccaactgttgcgccgcggtggcgttgatgaaagcgatctgacgcgtattaccagccgc
gttatggcctcgcgcccaggtgctctgcagcgcttcttgaacgagccagacgagtcggac
tcacccatggttaaacgactggccagcgtggtgccgacgtgggtggagatggccaaggat
ccaagtcgtgtggatcgggtgttcctaggactcaacatgttcatgagccgcaacatgtac
ggcgctcaggccagtcgggccaccatcgaacgcaacaatcgactactcgcgtcttgcgag
ggcagcatagcgcgcctctcaggcactcttaagcagcgtctgcagcacatccagcgccaa
gcagaaggtacagacgaagattccgatgcagtgcgtctgatgaccctgcacgcctccaag
ggactcgaattcaagcacgtctggatcgtcggctgcgagcagggcgtcatcccctccaat
cagtcgccagtcgaagaagagcgacggctgttctacgtcggaatgacgcgtgccaaactc
aatctgttcctcagctatcaacgtaactccgacgcgcagccatccgagttcctggcggaa
gctggcttgatctag
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integrated database retrieval system
