Xanthomonas perforans: BJD13_01705
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Entry
BJD13_01705 CDS
T04778
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe00040
Pentose and glucuronate interconversions
xpe01100
Metabolic pathways
xpe02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
BJD13_01705
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BJD13_01705
Enzymes [BR:
xpe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
BJD13_01705
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
APO97926
UniProt:
A0AAP2KD84
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Position
26746..27807
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AA seq
353 aa
AA seq
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MIIKTLHGALALALSACAAGAIAGPVGYGAATTGGGNKTPVNVATFEAVQAAIDNYSGSG
GLVLNYTGQFDFGTIKDVCAQWKLPAKTVQIKNKSDVTIKGANGSSANFGVRVVGNAHNV
IIQNMTIGLLQGGEDADSISLEGNSSGEPSKIWIDHNTIFASLTKCSGAGDASFDGGIDM
KKGVHHVTVSYNYVYNYQKVALNGYSDSDTKNSAARTTYHHNRFENVESRLPLQRRGLSH
IYNNYFNNVFTSGINVRMGGVAKIESNYFENIKNPVTSRDSSEIGYWDLINNYVGSGITW
STPDGSKPYANATNWVSSKVFPESLGYIYTVTPAAQVKAKVIATAGAGKNLAE
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaagacgctacacggcgcactcgcgcttgcactgtccgcttgcgccgcgggc
gcgattgccggcccggtcggttacggtgcggccactaccggcggcggcaacaagacacca
gtcaacgtggcgacgttcgaagcagtgcaggccgccatcgacaactattccggtagcggc
gggctggtgcttaactacaccggccagttcgacttcggcaccatcaaggacgtgtgcgcg
caatggaagctgccggccaagaccgtgcagatcaagaacaagagcgatgtcaccatcaag
ggcgccaacggctcgtcggcgaacttcggcgtgcgtgtggtaggcaatgcgcacaacgtg
atcatccagaacatgaccatcggcttgctgcaaggtggcgaagatgccgattcgatttcg
ctggaaggcaactccagcggcgagccgtccaagatctggatcgaccacaacaccatcttc
gcctcgctcaccaagtgctccggtgcaggcgatgcctccttcgatggcggcatcgacatg
aagaagggcgtgcaccacgtcaccgtgtcctacaactatgtctacaactatcaaaaggtc
gcgctcaatggctacagcgacagcgacaccaagaactcggctgcgcgcaccacgtatcac
cacaaccgcttcgagaacgtggaatcgcgcttgccattgcagcgccgcggcttgagccac
atctacaacaactacttcaacaatgtgtttacctcgggcatcaacgtgcgcatgggtggg
gtggccaagatcgagtccaactacttcgagaacatcaagaacccggtgacttcgcgcgat
agcagcgagatcggctactgggacctgatcaacaactacgttggcagcggcatcacctgg
agcacgccggacggcagcaagccctacgccaatgccaccaactgggtgagctccaaggtg
ttcccggagtcgctgggctacatctacaccgtgacgccggcagcacaggtcaaggccaag
gtgatcgccaccgcgggcgcgggcaagaacctggcggagtga
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