Xanthomonas perforans: BJD13_02500
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Entry
BJD13_02500 CDS
T04778
Name
(GenBank) DNA methylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJD13_02500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xpe03000
]
BJD13_02500
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_02500
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BJD13_02500
Transcription factors [BR:
xpe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BJD13_02500
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJD13_02500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
APO98070
UniProt:
A0A0G8TXL1
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All DBs
Position
complement(190438..191901)
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AA seq
487 aa
AA seq
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MQTATPDRTQCDRARLARDARFDGLFFTAVRSTGIYCRPVCPAPPPKPANVSYYPTAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIADGALQEQPVQTLADAVGLSARQLQ
RQFVQQLGATPIQVHGTHRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLHGCGMP
PSALRKQRTEVPGGELTLRLGYRPPLDLPAMLAFLQRRAIPGIEQVDANGYRRVIGPPGK
ASVIEVSAAPQRAELLLRIGATDPRQIPQIVRRVRRLFDLDADLQAVHATLAPEPLLAEA
LARRPGLRVPGGWDGFEVAVRAVLGQQISVAGAATLAARLVNRHGGHHADMPPGLDRSFP
TPEQLADAPLEQLGLPRARAATLRALASACAQGQLHFGAGQRLPDFIAACTALPGIGPWT
AHYVAMRALSHPDAFPAGDLILQQVLGAPGRLSERATEARSQAWRPWRAYAVLHLWHLAN
DRKDTRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccgcaacgcccgaccgaacccaatgcgaccgcgcgcgcctggcacgcgatgca
cgcttcgacgggctgtttttcaccgccgtgcgcagcaccggcatctattgccgcccggtg
tgtccggcgccgccgccgaagccggccaatgtcagttactaccccactgccgcggcagcc
agcgccgccggctaccggccgtgcctgcgctgccggccggagctgtcgccgcaggcgcag
caacatctgggcgaagaaagcgtgcagcgtgcgctggcgatgattgccgacggcgcgctg
caggagcagccggtgcagacgctggccgatgcggtgggcttgagcgcgcgccaactgcag
cggcaattcgtgcagcagctgggcgccacgccgatccaggtgcacggcacgcatcggctg
ctgctggccaagcaattgctgaccgaaaccgccctgccggtcaccgaggtcgcactcgcg
gccggcttcaacagcctgcgccgcttcaacgcggccttcctgcacggctgcggcatgccg
ccctctgcattgcgcaagcagcgtaccgaggtccccggcggcgaactgacattgcgcctg
ggctatcgcccgccactggatctgccggcgatgctggccttcttgcagcgccgcgcgatc
ccgggcatcgagcaggtcgatgccaatggctaccggcgcgtcatcggcccgccgggcaag
gccagcgtgatcgaggtcagcgcagcaccgcagcgcgcggaactgctgctgcgcatcggc
gctaccgacccgcgccagattccgcagatcgtgcggcgcgtgcgccggctattcgatctg
gatgcagacctgcaggccgtgcacgccacgctcgcgccggaaccactgctggccgaggcg
ctcgcgcgccgtcccgggctgcgcgtgcccggcggctgggacggcttcgaagtggcggtg
cgtgcggtgctgggccagcagatcagcgtggccggcgcagcaacgctggcagcgcggctg
gtgaaccgtcatggcggtcatcatgccgacatgccacccggactggatcgcagtttcccc
acgcccgaacagctggccgacgcgccgctggaacaactcggcctgccgcgtgcgcgcgcc
gccacgctgcgtgcgctggcatcggcctgcgcgcaaggccagctgcacttcggtgccggg
cagcgcctgcctgatttcatcgccgcctgcaccgcgctgcccggaatcgggccgtggacc
gcgcattacgtggccatgcgtgcgttgtcgcatccggacgcgtttccggccggcgacctg
atcctgcagcaggtgctcggcgctcccgggcgcctgagcgaacgcgccaccgaggcccgt
tcgcaggcgtggcgaccgtggcgcgcctacgccgtgctgcacctgtggcatctggccaac
gaccgcaaggacacccgcgcatga
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