Xanthomonas perforans: BJD13_03225
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Entry
BJD13_03225 CDS
T04778
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpe03016
]
BJD13_03225
Enzymes [BR:
xpe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BJD13_03225
Transfer RNA biogenesis [BR:
xpe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJD13_03225
Prokaryotic type
BJD13_03225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
APO98198
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All DBs
Position
352750..353676
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AA seq
308 aa
AA seq
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MKPRIVYRPLHGILLLDKPAGLSSNNALQAARRLLRADKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYHAEIVLGVTTDTDDADGEPLRERAVPDLSEADLQAALAPFIGRIQ
QQAPIYSALKQGGEPLYAKARRGERIEAPVREVHVQAIDVLGYSAPGLRLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRAPQMITLEALSAALEAGAEARTLLLPIEAGL
ADFARIVLDQAHAARFRMGQRLRDAAFPPGQVAVFGPDGTPSGLGLVDADGRLSPQRLFN
GLNEITAC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctatcgcccgttgcacggcatcctgctgctggacaagccggcc
gggctgagctccaacaatgcactgcaggccgcacgccggttattgcgcgcagacaagggt
ggccataccggcagcctggatccgctggctaccggcctgttgccgctctgttttggcgaa
gccaccaagatcgccggactgctgcttggttcagccaaggcataccacgccgagatcgtg
ttgggcgtcaccaccgacaccgacgatgccgacggcgagccgctgcgcgagcgtgcggtg
ccggatctgagcgaggccgatctacaggcggcgctggcgcctttcatcggccgtatccag
caacaagcgcccatttattccgcgctcaagcagggcggcgagccgctgtatgccaaggcg
cgacgcggcgaacgtatcgaagcgccggtgcgcgaggtgcatgtgcaggcgatcgatgtg
ctgggctacagcgccccaggtctgcggctgcgcgtgacctgcggctcgggcacgtatatc
cgcagcctggcacgtgacctgggcgaggtgctgggatgtggagcgcacatcgcctcgttg
cgtcggctgtgggtggagccgtttcgcgctccacagatgatcacgctcgaggcattgtcg
gcggcgctggaggcgggcgccgaagcacggacgctattgctgccgatcgaggccggcctg
gccgattttgcgcgaatcgtgctcgatcaggcccatgcggcgcgtttccgcatgggccag
cgcctgcgtgatgccgcatttccaccggggcaagtcgctgtattcggacctgacggaacc
ccctcggggctaggcctggtcgacgccgacgggcgcttgtcgccgcagcgattgttcaat
ggactgaacgaaattacggcctgttaa
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