Xanthomonas perforans: BJD13_05555
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Entry
BJD13_05555 CDS
T04778
Name
(GenBank) TetR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
xpe
Xanthomonas perforans
Module
xpe_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xpe03000
]
BJD13_05555
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
xpe01504
]
BJD13_05555
Transcription factors [BR:
xpe03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
BJD13_05555
Antimicrobial resistance genes [BR:
xpe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
BJD13_05555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
TetR_N
HTH_6
HTH_AsnC-type
HTH_26
Motif
Other DBs
NCBI-ProteinID:
APO98603
UniProt:
A0A0G8Z4E2
LinkDB
All DBs
Position
complement(886284..886856)
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AA seq
190 aa
AA seq
DB search
MSQDDQRLIRLLAATLTRRPRSNLTELAAGAGISRATLYRFAPTRAAIVEKVTAEAWLRL
QAALPDDDALPDPMASLRRMTHALVEDLDLVIYIVNEMGMEGAERGNTYYAAPEWESFQA
HLDAFFLHGQQRGVFGIEMPASWWSDFYLSCLFGAGWAVATGRLAQASVVRAVLTSFLEG
ARSGSRVQSP
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgagccaggacgaccaacgccttatccgcctgctggccgcaacgctgacccgccgccca
cgcagcaatctcaccgaactggccgccggcgcggggatcagccgcgcgacgctgtaccgc
tttgccccgacccgcgcggcaatcgtggaaaaggtcaccgccgaagcgtggctgcgtctg
caggcggccctgcccgacgacgacgccctgcccgatcccatggcaagcctgcgacgcatg
acgcacgccttggtggaagacctggatctggtcatctacatcgtcaacgagatgggcatg
gagggcgccgaacgcggcaacacctattacgccgcgccggagtgggagtcgttccaggcg
catctggatgctttcttcttgcacggccagcagcgcggcgtgttcggtatcgaaatgccg
gcgtcctggtggagcgacttctacctctcgtgcctgttcggagccggttgggcagtggcc
accggccgtctggcacaggcatcggtcgtacgtgcggtcctgacctcgtttttggaaggc
gcacgttccggttcgagagtgcaatctccctag
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