Xanthomonas perforans: BJD13_06680
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Entry
BJD13_06680 CDS
T04778
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
xpe
Xanthomonas perforans
Pathway
xpe02020
Two-component system
xpe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BJD13_06680
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BJD13_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xpe03021
]
BJD13_06680
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xpe02035
]
BJD13_06680
Transcription machinery [BR:
xpe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BJD13_06680
Bacterial motility proteins [BR:
xpe02035
]
Flagellar system
Flagellar assembly proteins
Stator
BJD13_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
APO98794
UniProt:
A0A0G9E3P1
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All DBs
Position
1146222..1146989
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AA seq
255 aa
AA seq
DB search
MSTATATTASAQYRAVQRNNANDVVTQHADLVRRIAHHLAARLPASVEVDDLIQAGMIGL
IEASRSYDSEQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAAAAVRKIEQNTG
RAAAATEVAAAMEMPLPDYLRLMEDAARGQVLSLESRIEDHGELDTTAKGGPNPQQMMER
GEFGRELGKAIGQLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQAVVRLRGR
LKVFELADAGVEVDD
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctaccgcaaccacggccagcgcgcagtaccgcgccgtgcagcgcaacaac
gccaacgacgtggtgacccagcacgccgacctggtccgccgcatcgcccaccatctggcg
gcgcgcctgccggccagcgtggaagtggacgacctgatccaggccggcatgatcggcctg
atcgaagcctcgcgcagctacgactccgaacagggcgcttcgttcgaaacctatgcctcg
atccgcatccgcggctcgatgatcgacgagattcgcaggggcgactgggtgccgcgttcg
gtgcaccgccgcgcccgcgacgctgccgccgccgtgcgcaagatcgaacagaacaccggc
cgcgccgccgccgccaccgaagtggccgccgccatggaaatgccgctgcccgattacctg
cgtctgatggaagatgccgcacgtggccaggtgctgagcctggaatcgcgcatcgaagat
cacggcgagctggacaccaccgccaagggtggccccaacccgcagcagatgatggagcgt
ggcgaatttggtcgcgagctgggcaaggccatcggccaattgcccgagcgcgagcagctg
gtgctgtcgctgtactacgaacaggaattgaacctgaaggaaatcggcgccgtgctgggc
gtcagcgaatcgcgcgtgtgccagatccacggccaggcggtggtgcgtttgcgtggccgc
ctcaaagtcttcgaactggccgatgccggcgtcgaagtcgacgactga
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integrated database retrieval system
