Xanthomonas perforans: BJD13_07015
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Entry
BJD13_07015 CDS
T04778
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03410
Base excision repair
xpe03430
Mismatch repair
xpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJD13_07015
03430 Mismatch repair
BJD13_07015
03440 Homologous recombination
BJD13_07015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_07015
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BJD13_07015
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BJD13_07015
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BJD13_07015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
APO98852
UniProt:
A0A0G9BAX1
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Position
complement(1242015..1243754)
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AA seq
579 aa
AA seq
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MTSPPRIVRRPSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVA
AELLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGMSPA
LVDELAALQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEMLPPADAIVDPNLA
EDTFPSKTLAGVGVIFYVLLALRSVLRKRGAFAGRAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
GIELLLSEDWSQAREIAGTLEEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPMAACLF
DADWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSARSIPGLHIRDVLAAVDARH
PGLIQKFGGHAMAAGLSIDHAVLATFEQAFLAQVTAMVDASLLHAQLHSDGELAAHELDH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKDRHLKLTLRCPGRAEPLNAIHFNGWR
GSDPARLVRLAYRLVADDYRGGTAVQLIVEHCEPVTVTG
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgcctccgcggatcgtccggcgcccctccgggcaggccggcagctggcccgat
accatgttgccgctgctgcgtcgcatctatgcagcgcgtggcgtcaccgatgcgcaaggc
gcgcagccgcgactgggccagttgttgtcgccggaattgctgcacaacagcggcgtggcc
gccgagctactggccgatgcgatcgcgcagcaacggcgcattctggtggtgggcgatttc
gactgcgatggcgccaccgcctgcgccgtcggtgtgcgcggcctgcgcatgctcggtgcg
ctggatgtgcaccacgccgtgcccaatcgcatggtgcacggctatggcatgtcgcctgcg
ttggtcgacgaactggcggcgttgcagccggatgtgctggtcaccgtcgatcacggcatc
gcctgtcacgccggcgtggccgcagccaaggcgcgcggctggacggtgctggtcaccgac
caccacctgccgggcgagatgctgccgccggccgatgcgatcgtcgacccgaacctggcc
gaagacaccttccccagcaagaccctggccggggtcggggtgatcttctatgtgttgctc
gcattgcgcagcgtgttgcgcaaacgcggcgccttcgccgggcgcgccgagccggatttg
tcggtgctgctggatctggtcgcagtcggtaccgttgccgatctggtaccgctggacacc
aataaccgtgcgctggtgtcggccggattgcgtcgcctgcgtgagggcaagggctgcatc
ggattgcgggccttgatcgatgccagcggccgcgatgtggcgcggctgagcgccagcgat
atcgggtttgcgctcgggccgcgcctcaatgccgccggtcggctcgaggacatggcgctg
ggcatcgaactgttgctcagtgaagactggagccaggcccgcgagatcgccggcacgctg
gaagagatcaacgccgagcgccgcgcggtgcagcagttgatgaccgacgatgccgagcac
gccgtcaccaaggtggtgctggatggcgatggtgcattgccgatggctgcgtgcctgttc
gatgccgactggcacccgggcgtgatcggtctggtggcctccaaactcaaggaccgcctg
caccgcccggtgatcgccctggcaccggccgagccgggcagcagccagttgcgtggctcg
gcgcgttcgattcccggcctgcatatccgcgatgtgctggcggcggtggacgcgcggcat
cccgggctgatccagaagttcggtggccatgcgatggcggccgggttgagtatcgaccat
gcggtattggccacgttcgagcaggccttcctggcgcaggtgacggcgatggtggatgcc
tcgctgctgcatgcccaattgcacagcgacggcgaactggccgcgcacgaactcgatcac
ctgcatgccgaagcgctgcgcgtggccggtccgtgggggcagggctttccagaaccgctg
ttcgatggtcagttcgaggtgctgcagcaccgcgtactcaaggaccgccacctcaagttg
accctgcggtgccccgggcgcgccgagccgctcaatgccatccacttcaacggctggcgc
ggcagcgaccccgcgcgcttggtgcggctggcgtatcggttggtcgccgacgactaccgc
ggcggcacggcggtgcagttgatcgtggagcattgcgagccggtgaccgtcactggctga
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