Xanthomonas perforans: BJD13_07400
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Entry
BJD13_07400 CDS
T04778
Name
(GenBank) type VI secretion protein
Organism
xpe
Xanthomonas perforans
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TraG-D_C
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
APO98921
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Position
complement(1337322..1339019)
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AA seq
565 aa
AA seq
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MTGKIKLSVTIALLLLALTAGVYLSGQLILMLLKVAGPLTVGTYWSYFKALDLPQFAPYA
TKIKLAGALGFGVPLLAWIALLIPLFKPKAAALHGDARFASGSDLAKKDMLKPSPTGIVV
GKHGGKLVRLPGQQFVILAAPTRSGKGVGIVIPNLLDYQGSVVVLDIKQENFDLTSGWRK
SQGQKVFLFNPFAEDGRTHRWNPLSYISPDPAFRVSDLMSVAAMLYPDGSDAQKFWVSQA
RNAFMAFTLYLFDSLDDQIKRKHPKDTWMFPTLGMIYRVSSGDGSDLKGYLKKLSQRDFL
GRDAKMAFDNLLSQAEETFASIMGTFKEPLNQFINPILDAATSGNDFLLTDVRKKKMSIY
IGIQPNKLAESRLLINLLFSQLINLNTKELPQNNPALKHQCLLLMDEFTSIGRVDIIASA
VSYMAGYNIRLLPIIQSMAQLDATYGKDVSRTIITNHALQIVYAPREQQDANDYSDMLGY
TTVRKKNKSHTSGKQSSVSYSETEQRRALMLPQELKAMGFDKEVFLYEGIPSPVLCEKIK
YYEDAYFTKRLLPKVKIEALQMVPA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcaagatcaagctcagtgtcaccatcgcgctcttgctcctcgccctcaccgca
ggggtctacctttccgggcaattgatcttgatgctcttgaaggtggctgggccgctcacg
gtcggcacctactggtcttacttcaaagcgctcgacctcccacagttcgctccctatgcc
accaagatcaagctggctggcgccctcggcttcggtgtgccgctgctggcctggatcgca
ctgctgatcccgttgttcaagccaaaggcggccgccttgcatggcgacgcacgctttgcc
tctggcagtgatctcgccaagaaggacatgctcaaaccgtcgccaaccggcattgtggtt
ggcaagcacggtggcaagttggtgcgcctacctgggcaacagtttgtgatcctggccgcg
cccacgcgttcgggtaaaggcgtgggcatcgtcattcccaatctgctcgactaccaaggc
tcggtggtggtcctggatatcaagcaggaaaacttcgatctcacttctggctggcgcaag
agccagggtcaaaaggtctttttgttcaaccccttcgcggaagatgggcgcacgcatcgc
tggaatccgctgagctacatctcgcccgatcccgcctttcgtgtgtcggatctgatgagt
gtcgcggcgatgctctacccggatggctccgatgcccagaagttctgggtgagccaagcg
cgcaatgccttcatggcgtttacgctctatctgttcgatagccttgacgatcagatcaag
cgtaagcatccaaaagacacctggatgttcccaacgcttgggatgatctatcgcgtgtcg
tctggcgatgggagcgacttgaagggctacctcaaaaagctctcgcagcgcgacttccta
ggacgcgatgccaagatggcctttgacaacttgctctcgcaagccgaagagaccttcgcc
tcgatcatgggcacgttcaaggagccgctcaaccagttcatcaacccaatcctggatgcg
gcaaccagtggcaacgatttcttgctgaccgatgtgcgcaagaagaagatgagcatctac
atcggcatccagccgaacaagcttgccgaaagccgcttgttgatcaacttgctgtttagt
cagctcataaacctgaacacgaaagagctgccgcagaacaacccggcgctcaagcaccag
tgcttgctgctgatggatgagttcacgtccatcggccgggtcgacatcattgccagcgcg
gtgagctacatggccggctacaacatccgcttgctgccgatcatccagagcatggcgcag
ctggacgcgacctatggcaaggatgtctcgcgcaccatcatcaccaaccatgccctgcaa
atcgtctacgccccacgggagcagcaagacgccaacgactactcggacatgctcggctac
accacggtgcgcaagaagaacaagtcgcacaccagtggcaagcaaagcagcgtgtcttac
tccgagaccgagcaacgccgtgccttgatgctgccgcaagagttgaaagcgatgggcttt
gacaaggaagtcttcctctatgaaggcatcccaagcccagtgctttgcgagaagatcaag
tattacgaagatgcctacttcaccaagcgcttgttgccgaaggtgaagattgaagcctta
cagatggtccccgcatga
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