Xanthomonas perforans: BJD13_07985
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Entry
BJD13_07985 CDS
T04778
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpe03016
]
BJD13_07985
Enzymes [BR:
xpe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BJD13_07985
Transfer RNA biogenesis [BR:
xpe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BJD13_07985
Prokaryotic type
BJD13_07985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APO99020
UniProt:
A0A0G8WHX2
LinkDB
All DBs
Position
complement(1461294..1462403)
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AA seq
369 aa
AA seq
DB search
MSETSLLPRAHGAAVLSAAMRSTPDDFQVDELPAFEPSGEGEHLLLTVRKRGQNTAYIAK
QLAHWAGIAEMGVSYAGLKDRHAVTTQRFSVHLPKRIAPDIAALDDAQMQVVQSAWHNRK
LQRGALHGNRFVLTLRQVQGEREAIEQRLQAIAARGIPNWFGEQRFGRDGANVAAALAMF
GHVQAEDGTLLPAPTSRRRLRNDQRSMLLSAARSVLFNRVLGARVAQGSWDSALQGEAWM
LDGSRSVFGPEPWSEALAERLARFDIHPSGPLWGIGALRSTDQAAALEQGALSDPQSEAL
RQGLEAAGLKQERRALRLRPQGLDYRWLEAQTLQLEFALPPGCYATAVLWELGDVTDAGR
FNVGMRADA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacctctttgctgccgcgtgcgcatggcgctgccgtgctcagcgcggcgatg
cgcagcaccccggacgatttccaggtcgacgagctgccggcattcgagccctccggcgaa
ggcgagcatctgctgctcaccgtgcgcaagcgtggccagaacaccgcctatatcgccaaa
cagcttgcgcactgggccggcatcgccgagatgggcgtcagctatgcgggtctgaaagat
cgccatgcagtgaccacccagcgcttcagcgtgcatctgcccaagcgcatcgcgccggat
atcgccgcgctggatgatgcgcagatgcaggtggtccagagcgcctggcacaaccgcaag
ctgcaacgcggtgcgctgcacgggaaccgcttcgtgctgacgctgcgccaggtgcagggc
gagcgcgaggcgatcgagcaacggctgcaggcgattgctgcgcgtggcattcccaattgg
ttcggcgaacaacgcttcggtcgcgatggcgcaaatgtggcggctgcgctggcgatgttc
ggtcatgtgcaagctgaggacggaacgttgctgccggcgcccacatccaggcggcggctg
cgcaacgatcagcgctcgatgttgctgtcggcagcgcgttcggtcctgttcaatcgcgtg
cttggcgcacgcgtggcgcagggcagttgggatagcgcactgcagggcgaggcgtggatg
ctggacggctcgcgcagcgtcttcggcccggagccgtggagcgaggccctggcagagcga
ttggcacgtttcgatatccatcccagcgggccgttgtggggcattggcgcgttgcgctcg
accgatcaagcggcagcgctggagcagggcgcgttgtccgatccgcaatccgaagcattg
cgccaaggcctggaagcagcggggctgaagcaggagcgccgcgcgctgcgcttgcgcccg
cagggtctggactatcgatggctggaggcacagaccctgcaattggagttcgcgctgccg
cctggctgttatgccaccgcggtgctgtgggaactgggagatgtcaccgacgccggtcgc
ttcaacgtcggcatgcgcgccgacgcatga
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