Xanthomonas perforans: BJD13_08605
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Entry
BJD13_08605 CDS
T04778
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BJD13_08605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_08605
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BJD13_08605
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BJD13_08605
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJD13_08605
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BJD13_08605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
APO99125
UniProt:
A0A0G8W0X9
LinkDB
All DBs
Position
1586502..1587947
Genome browser
AA seq
481 aa
AA seq
DB search
MPDSFLFYDLETFGQDPRRTRIAQFAAVRTDAQLRVIEEPISFFVQPADDLLPSPYATMV
TGITPQHALREGVTEAEAFARIAEQMGRPQTCTLGYNSIRFDDEFIRCGLFRNFYDPYER
EWRGGNSRWDLLDVLRLVHALRPDGIVWPQREDGATSFKLEHLADANDVREGDAHEALSD
VYATIGMARKFQQHQPKLWDYALRLRDKRFAATLLDVIAMQPVLHISQRYPASRLCAAAV
LPLTRHPRIDSRVIVFDLEGDPEVLLRLSPDDIADRLYIRAADLPEGEQRIPLKEVHLNK
SPALVAWQHLRAADFQRLGVDHDAVVAKAARLRALGPELAEKVRQVYGSERAAVAAVNDA
DASLYDGFLAEGDKRLLAQVRASAPDELGALEARFRDPRLIELLFRYRARNWPQTLSFEE
QERWNVYRRQRLLEDRGLGEVTLEQYHAQIADLRRTHPDDATKQALLDQLAAWGSDLQRT
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacagctttctcttctacgacctggaaaccttcggccaggatccacgccgcacc
cgcatcgcacagttcgctgcggtgcgcaccgatgcgcagttgcgcgtgatcgaagagccc
atcagctttttcgtgcagccggccgatgatctgctgccctcgccctatgccaccatggtg
accggcatcaccccgcaacatgcgctgcgcgaaggcgtcaccgaagcagaggcgttcgcg
cgcatcgccgaacaaatgggccggccccagacctgcacgctgggctacaactcgatccgc
ttcgacgacgaattcatccgctgcggcctgttccgcaatttctacgacccgtacgagcgc
gagtggcgtggcggtaactcgcgctgggacctgctggatgtgctgcgactggtccatgcg
ctgcgcccggacggcatcgtctggccgcagcgcgaagatggcgctacctcgttcaagctg
gagcacctggccgatgccaacgatgtgcgcgaaggcgatgcgcacgaagccttgtcggac
gtgtacgccaccatcggcatggcgcgcaaattccagcagcaccagccaaagttgtgggac
tacgcgctgcgcctgcgcgacaagcgctttgccgccaccttgctggatgtcatcgccatg
cagccggtgctgcatatctcgcagcgctaccccgcctcgcgcctgtgcgccgcggcggtg
ttgccgctgacgcgccacccgcgcatcgacagccgcgtgatcgtgttcgatctggagggc
gacccggaggtgttgttgcggctgagccccgacgatattgccgaccgcctgtacatccgc
gccgcggatctgccggaaggcgaacagcgcattccgttgaaggaagtgcatctgaacaag
tcgcccgcgctggtggcctggcagcatctgcgcgctgcagattttcagcgcctgggtgtg
gatcacgacgcggtagtggccaaggcggcacgcttgcgcgccttgggccctgaacttgcc
gagaaggtgcgccaggtctacggcagcgaacgcgccgcggtagcggcggtcaacgatgcc
gatgcctcgctctacgatggatttctggccgaaggcgacaaacgcttgcttgcacaggtc
cgcgccagcgcgccggacgaactgggcgcgctggaagcgcgctttcgcgacccgcgcctg
atcgagctgctgtttcgctaccgcgcgcgcaactggccgcagacactctcgttcgaggaa
caggagcgctggaacgtgtatcgccgccagcgcctgctcgaagaccgcggcctgggtgaa
gtcaccctggagcaataccacgcgcagattgcggatttacggcgtactcaccccgacgat
gctaccaagcaagccctactcgatcagctcgccgcctggggttcggacctccaacgcacg
ctatga
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