Xanthomonas perforans: BJD13_09750
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Entry
BJD13_09750 CDS
T04778
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xpe03016
]
BJD13_09750
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BJD13_09750
Transfer RNA biogenesis [BR:
xpe03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BJD13_09750
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
APO99331
UniProt:
A0A0G9CDC0
LinkDB
All DBs
Position
complement(1837059..1837661)
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AA seq
200 aa
AA seq
DB search
MKQQFLYLSSAEAQLSLGLGEEKTTERLFFAVMADASTAEHAARIADRLLQGGHAQGKAL
ARERLHVTLHHLGDYAGGLPPSLVSRASQAATRVQMDAFEVEFDRVGTFGGRRSQLPCVL
RGEEQVRGLYELQGALGRQLAHVGIAGDAQYTPHMTLLYCNQAVPQRRCDALAWTVRDFA
LVRSFLGQSRYQIEGRWSLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaacagttcctgtatctgtcatcggccgaggcacagctgtcgctcgggcttgga
gaagagaagaccaccgaacgtctgtttttcgcggtgatggccgatgcgtccactgccgag
catgcagcgcgcattgccgatcgcctgttgcaaggcgggcacgcccaaggcaaggcgctt
gcgcgcgaacggctgcatgtgaccctgcatcatctgggtgattacgccggtggtctgccg
ccatcgttggtgagccgcgccagccaggcagcgacgcgcgtgcagatggacgcgttcgag
gtggagttcgatcgcgtcggcaccttcggcggcaggcgctcgcaacttccctgcgtgctg
cgtggcgaagagcaggtgcgcgggctttacgagctgcagggcgcattgggaaggcagctg
gcgcatgtgggcattgccggtgatgcgcaatacacgccgcacatgacgctgctgtactgc
aatcaggcagtgccgcagcgacgctgcgatgcgcttgcctggaccgtgcgcgatttcgcg
ctggtacgtagctttcttggccagtcgcgctaccagatcgaaggccgctggtcgctgcgc
tga
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