Xanthomonas perforans: BJD13_09985
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Entry
BJD13_09985 CDS
T04778
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
BJD13_09985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xpe03019
]
BJD13_09985
03009 Ribosome biogenesis [BR:
xpe03009
]
BJD13_09985
03036 Chromosome and associated proteins [BR:
xpe03036
]
BJD13_09985
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
BJD13_09985
Messenger RNA biogenesis [BR:
xpe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJD13_09985
Ribosome biogenesis [BR:
xpe03009
]
Eukaryotic type
90S particles
RNase
BJD13_09985
Prokaryotic type
rRNA processing factors
BJD13_09985
Chromosome and associated proteins [BR:
xpe03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
BJD13_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
APO99370
UniProt:
A0AAP2W1X7
LinkDB
All DBs
Position
complement(1879674..1880354)
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AA seq
226 aa
AA seq
DB search
MSNRTFQRGDPIGHAFADPALLAQALRHRSAGTPHNERLEFLGDGIVNLLIAEALYQRWP
KADEGALTRARAELVREGALAVIGRTLNLGERLTLGPGELKSGGHRRDSILADAVEAIVA
AIYLDCGFERCRAVVLPWFEASLAALPVGKAEKDPKTRLQEWLQARQLPLPTYALISESG
DEHAKQFHVACILEQPVARAEGQGTSRRLAEQQAATLVIAQLDSNT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaatagaaccttccaacgcggtgatccgatcgggcacgcattcgccgatccggct
ctgctcgcccaggcgctgcggcaccgcagcgccgggacgccgcataacgagcgactggaa
tttctcggcgacggcatcgtcaacctgctgatcgccgaggcgctctatcaacggtggccc
aaggccgacgaaggcgcattgacccgtgcacgtgccgagctcgtgcgcgaaggtgcgctg
gcagtgatcggacgcacgttgaacctcggcgagcgcctcacgctggggccaggcgagctg
aagtccggaggtcaccggcgcgattcgatcctggccgatgcggtcgaggcgatcgtcgca
gccatctatctggactgcggtttcgagcgttgccgtgcagtggtgctgccgtggttcgaa
gcgtcgctggcggcattgccggtgggcaaggcagaaaaggatcccaagacccggctgcag
gagtggctgcaggcacggcaactgccgctgcccacctacgcgctgatcagcgagagcggc
gacgagcatgccaagcagttccacgtcgcctgcattctggagcagccagtcgcccgcgcc
gagggccagggcacttcgcgtcgcctcgcagagcaacaggcggcgactcttgtcatcgca
caactggattcaaacacgtga
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