Xanthomonas perforans: BJD13_11040
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Entry
BJD13_11040 CDS
T04778
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
xpe
Xanthomonas perforans
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xpe03000
]
BJD13_11040
Transcription factors [BR:
xpe03000
]
Prokaryotic type
Helix-turn-helix
Other families
BJD13_11040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
HTH_23
AAA
HTH_17
nSTAND3
HTH_28
AAA_7
HTH_Tnp_ISL3
HTH_Tnp_1_2
Motif
Other DBs
NCBI-ProteinID:
APO99551
LinkDB
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Position
2140677..2142296
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AA seq
539 aa
AA seq
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MKRDTVMRPPAPPETADASLPIIWTVSVSRLTGLLADVIPEFDQRARIEQINLGFAEAVE
VIGQRLRRERCDALVAGGSNAAYLRSRLALPLAPIQATGFDLMEALARARRIAPRIGVVT
HATDVPSFRAFQHSFDLEIEHRRFVTAEDARDCIADLRASGIQVIVGTGMAIDFAEQAGL
PGVLLYSADSVRHALEQAIALGTAPGIDRVAGRAAPRRARRADALLGEDGAMLRVRELVQ
LYAPHTGTVLISGDTGTGKELVARQLHAGSRRRGRFVAINCGAISESLLEAELFGYSDGA
FTGARRGGHTGLIEAAQDGTLFLDEIGELPVPLQTRLLRVLEEREVVRVGATVPVAIDVR
VVAASLLDLQQLVEQGRFRRDLFYRLAALRIALPPLRNRRNDIALLLAHYFQQLGSIASP
LSPAALQRLQQHTWPGNVRELRNLVERLCIHWKAQAHDSLSLEQLERWVPELFDTHFGNH
EAPRELADLATSRLQLTATAVRAALDRANGNRALAAQALGVSRTTLWRWMQAQAVASRA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcgacaccgtcatgcgcccccctgcccctccggaaaccgcagacgcctccttg
cccatcatctggaccgtcagcgtctcgcgcctgaccggcctgctggccgatgtcatcccc
gagttcgaccagcgcgcgcgcatcgagcagatcaacctcggctttgccgaagcggtcgag
gtcatcggccagcgcctgcgccgcgagcgctgcgacgcgctggtggccggcggatccaat
gcggcgtacctgcgcagccggctcgcgctgcccttggcgcccatccaggccaccgggttc
gatctgatggaagcgctggcgcgagcgcgccgcattgcgccacgcatcggcgtggtcacc
cacgccactgatgtgccgtcgttccgcgcgtttcagcacagcttcgatctggagatcgaa
caccgccgtttcgtcaccgccgaagacgcacgcgactgcatcgccgatctgcgcgccagc
ggcatccaggtcattgtcggcaccggcatggcgatcgacttcgccgagcaggcggggctg
cctggcgtgctgctgtattcggccgattcggtgcgtcatgcgctggaacaggccatcgcg
ctgggcaccgctccaggcatcgatcgcgtcgccggccgtgccgccccgcgccgtgcacga
cgcgccgacgccctgctgggcgaagacggcgcaatgctgcgcgtgcgcgagctggtgcag
ctctacgcaccgcataccggcaccgtgttgatcagcggcgacaccggcaccggcaaggaa
ctggtcgcacgacaactgcatgccggcagtcgtcgccgcggccgtttcgtggcgatcaac
tgtggcgccatcagcgaatcgttgctggaggcggaactgttcggctacagcgacggcgcc
ttcaccggcgcacgtcgcggcggccacaccggcctgatcgaagctgcgcaggacggcacg
ctgttcctcgacgaaatcggcgaattgcccgtgccgttgcagacccggctactgcgcgtc
ctggaagaacgtgaagtagtgcgtgtcggcgcaacggtgcccgttgcgatcgacgtgcgc
gtggtcgccgccagcctgctggacctgcagcagttggtcgaacaaggccgcttccgccgc
gacctgttctatcgccttgccgcgctgcgcatcgcactgcctccgttgcgcaatcgccgc
aacgacattgcgttgttgcttgcgcattatttccagcaactcggcagcatcgcatcgccg
ttatcgccagcggcattgcaacgcctgcaacagcacacctggcccggcaacgtacgcgaa
ctgcgcaacctggtcgaacgcctgtgcattcactggaaagcccaagcgcacgacagcctg
agcctggagcaactcgaacgctgggtgccggaattattcgatacgcatttcggcaaccac
gaagcaccgcgtgagcttgccgatttggcaacctctcgcctgcagctcactgccaccgca
gtccgcgcagcgctcgaccgcgccaacggcaaccgcgcccttgccgcgcaagcgctcggc
gtctcgcgcaccacgctgtggcgctggatgcaggcgcaggcggtggcatcgcgtgcataa
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