Xanthomonas perforans: BJD13_11800
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Entry
BJD13_11800 CDS
T04778
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BJD13_11800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xpe03021
]
BJD13_11800
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_11800
Enzymes [BR:
xpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BJD13_11800
Transcription machinery [BR:
xpe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BJD13_11800
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BJD13_11800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
APO99680
UniProt:
A0A0G9C6V5
LinkDB
All DBs
Position
complement(2287921..2288919)
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AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRMHSGDSATLSLSKQGPGTVTAADIRTDHN
VEIINGDHVICHLTKDTALNMRLKIERGFGYQPAAARRRPDEETRTIGRLMLDASFSPVR
RVAYAVEAARVEQRTDLDKLVIDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPAASGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLALGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtggtccgcagatcgaacgtcttacc
gacaaccgcgccaaggtcgtgatcgaacccttggagcgcggttacgggcacacgctgggc
aatgccctgcgtcgtgtgttgttgtcgtcgatccccggttttgcgatcaccgaggtcgag
atcgacggcgtgctgcacgagtacaccacggtggaaggtttgcaggaagacgtgcttgac
gtcctgctgaacctgaaagacgtggcgattcgtatgcacagtggcgacagcgccacgctg
tcgttgtccaagcagggtccgggtacggtcactgcggcagacatcaggaccgatcacaac
gttgagatcatcaacggcgaccacgtgatctgccacctgaccaaagacaccgcattgaac
atgcgcctgaagatcgagcgtggctttggctaccagccggctgctgcgcgtcgtcgcccg
gatgaagagacccgcaccatcggtcgtctgatgctggatgcgtcgttctcgccggtgcgt
cgcgttgcctacgccgtggaagctgcgcgcgtcgaacagcgtaccgacctcgacaagctg
gtcatcgatatcgaaaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgatcagctgtcggtgttcggcgatttcacccaccgcgatcgcggtgcg
gccaagccggctgccagcggcgtggatccggtgctgctgcgcccgatcgacgaccttgag
ctgaccgtgcgttcggccaactgcctcaaggccgagagcatctactacatcggcgatctg
atccagaagaccgaagtcgagctgctcaagaccccgaatctgggcaagaagtcgctgaca
gaaatcaaggaagtgctggcacagcgcggccttgcgctgggcatgaagctggagaactgg
ccgccggccggtgtcgcccagcacggcatgcttggttaa
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