Xanthomonas perforans: BJD13_13020
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Entry
BJD13_13020 CDS
T04778
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe00260
Glycine, serine and threonine metabolism
xpe00460
Cyanoamino acid metabolism
xpe00630
Glyoxylate and dicarboxylate metabolism
xpe00670
One carbon pool by folate
xpe00680
Methane metabolism
xpe01100
Metabolic pathways
xpe01110
Biosynthesis of secondary metabolites
xpe01120
Microbial metabolism in diverse environments
xpe01200
Carbon metabolism
xpe01230
Biosynthesis of amino acids
xpe01240
Biosynthesis of cofactors
xpe04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BJD13_13020 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BJD13_13020 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BJD13_13020 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BJD13_13020 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BJD13_13020 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BJD13_13020 (glyA)
Enzymes [BR:
xpe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BJD13_13020 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Phage_capsid
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
APO99891
UniProt:
A0A0G8XSW7
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All DBs
Position
complement(2528710..2529963)
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AA seq
417 aa
AA seq
DB search
MFSRDVRLETYDPELAKAIAAEAGRQEDHVELIASENYCSPLVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDIAEQLAIDRIKQVFGADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKVNVSGKLFNAVQYGVNEQGLIDYDEVQRLATEHKPKMVVAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVIKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNSVPNDPRSPFVTS
GLRLGTPAITTRGYQEQDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgatgtccgactggaaacctacgaccccgaactggccaaggccatcgct
gctgaagccggccgccaggaggatcatgtcgagctgatcgccagcgaaaactattgcagc
ccgctggtgatggaagcgcagggcagccagctgaccaacaaatacgccgaaggctatccg
ggcaagcgctactacggcggctgcgagttcgtcgacattgccgaacaactggcgatcgac
cgcatcaagcaggtgtttggcgccgattacgcgaacgtccagccgcacagcggttcccag
gccaaccaggcggtgtatctggcgctgctgcagccgggcgacaccatcctgggcatgagc
ctggcgcatggcggccacctgacccacggcgcaaaggtcaacgtctccggcaagctgttc
aacgcggtgcagtacggcgtcaacgagcagggcctgatcgactacgacgaggtccagcgc
ctggcgaccgagcacaagccgaagatggtggtggccggtttctccgcgtattcgcagaag
atcgactgggcccgcttccgcgccatcgccgacagcgtcggggcctacctgttcgtggac
atggcgcacattgccgggctggtcgccgccggggtgtacccgagcccgatggaacatgcg
cacgtggtcacttcgaccacgcacaagacactgcgtggcccgcgtggcggcatcatcgtc
gccaagggcgccagcgaagagctgcagaaaaagctgcagtcgatcgtgttccccggcatc
cagggcggcccgctgatgcacgtcattgcggccaaggcggtggcgttcaaggaggcgctg
gagccggcgttcaagacctatcagcaacaggtgatcaagaatgcccaggcgatggccaat
accctcattgcgcgcggctacaagatcgtctccggcggcaccgagaaccacctgatgctg
gtggacatgatcggtcgcgatgtctccggcaaggacgccgaagctgcgcttggcaaggcg
cacatcaccgtcaacaagaattcggtccccaacgacccgcgctcgccgttcgtcacttcc
ggtctgcgcctgggcaccccggcgatcaccacgcgcggttaccaggaacaggacagcatc
gacctggccaactggatcgccgacgtgctcgacgcgccaaccgacgaagccgtgctggcg
aaggtgcgcgatgccgtgaccgcgcagtgcaagcgctatccggtgtatggctaa
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