Xanthomonas perforans: BJD13_13410
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Entry
BJD13_13410 CDS
T04778
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe00550
Peptidoglycan biosynthesis
xpe01100
Metabolic pathways
xpe01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJD13_13410
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BJD13_13410
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xpe01011
]
BJD13_13410
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BJD13_13410
Peptidoglycan biosynthesis and degradation proteins [BR:
xpe01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BJD13_13410
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
APO99957
UniProt:
A0A0G8YLW2
LinkDB
All DBs
Position
complement(2616500..2618560)
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AA seq
686 aa
AA seq
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MHGRRHPKNPHAEAEQFRRRAVLGFVMVVICLVGLGGWYFKLQVLDHEVYATRSEANRIK
PKPVVPGRGMIYDRTGRLLAENVPAFRLDVTPDKVADMNAMLDALGKVIPIAPEDLERFN
RERRARRSFLPVTLKLRMSDEEMARFAVERWRFPGVELEPYLTRRYPYGPLFAHIIGYVG
RIDEKDLAVLGEGNAALTHMGKSGLERYYEQDLRGQVGYEQVETNVQGRAIRTVGRVAPQ
SGADLRLSVDADLQRAMVAAFGEHEGAAIAMDPRTGEILGMVSLPSYDPNLFVNGISHTD
FKMLNDNPSRPQFNRLVLGGVAPGSTLKPLIALAGLDSGLRRPEDRVLSTGMFYLPGVSR
GWGDSHRGGHGWTDLRKSIAQSVNTYYYRLAVDMGIERFDHYMSEYGFGQPTGVDLLGEI
GGILPSPAYKYKTRKERWYPGDTVNIAIGQGDWKVTPLQLVRGVSAIASGLLLRPHLVLE
ERTGFDHPWEPMIQPPGKPLSQNPAHLQVVREGMMDTMRPGGTGYAITPGAPYQMAGKTG
TAQVVSRKGVAAVDPRSLPLHLRHRGLFVGFAPADNPVIAVAVAVEGGGFGTSSAAPIAR
KIFDAWLLGKMPAGLEPLDSELGMTAVGVNQFEAGVTDARAAGDAAAATLDELPVVIGQS
AVALDPNTPAQPVVPDVPDAVQETDH
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggcgccgtcatcccaagaatccgcatgcggaggccgaacagttccgccgtcgc
gcggtgctgggctttgtgatggtggtgatctgcctggtcggcctgggcggctggtatttc
aagttgcaggtgctcgaccacgaggtctacgccacccgttcggaggccaaccgcatcaag
cccaaaccggtggtgcccgggcgcggcatgatctacgaccgcaccggccggctgctggcc
gaaaacgtgccggccttccgtctggacgtgacccccgacaaggtcgccgacatgaacgcc
atgctggacgcgttgggcaaggtgatcccgatcgcgccggaggatctggagcgcttcaac
cgcgagcgccgcgcacgccgcagctttttgccggtgacgctcaagctgcgcatgagcgat
gaagagatggcacggttcgcggtggagcgctggcgcttccccggcgtggagctggaaccg
tatctgacccggcgttatccctacggcccgttgttcgcgcacatcatcggttatgtgggc
cggatcgacgaaaaagacctggcagtgctgggcgagggcaatgctgcgctcacccatatg
ggcaaatccgggctggagcgctactacgagcaggatctgcgcgggcaggtcggttacgag
caggtcgaaaccaatgtgcaggggcgggccatccgcaccgtcggccgggtcgccccgcag
tcgggtgcggatctgcgcctgtcggtagacgccgacctgcagcgcgcgatggtggccgcc
ttcggcgagcacgaaggggcggccattgcgatggacccgcgcaccggcgagatcctgggc
atggtcagcctgcccagctacgaccccaacctgttcgtcaacggcatctcgcataccgat
ttcaagatgctcaacgacaacccgtcccggccgcagttcaaccggctggtgctgggcggc
gtggcgccgggctccacgctcaagccgctgatcgcgttggccggcctggacagcggcctg
cgccggccggaagaccgggtgctgtccaccggcatgttctacctgcccggcgtcagccgc
ggttggggcgattcgcaccgcggcgggcatggctggaccgacctgcgcaagtcgatcgcc
cagtcggtcaatacctactactaccgcctggcggtggatatgggcatcgagcgcttcgac
cactacatgtccgagtacggcttcggccagcctaccggggtggacctgctgggcgaaatc
ggcggcatcctgccgtcgcccgcctacaagtacaagacgcgcaaggagcgctggtatccc
ggcgacacggtcaacatcgccatcggccagggcgactggaaggtcacgccgctgcagctg
gtgcgcggcgtctcggcgatcgccagtggcctgctgctgcgcccgcacctggtgctggaa
gaacgcaccggtttcgatcatccctgggagccgatgatccagccgcccggcaagccgctc
agccagaacccggcgcatctgcaggtggtgcgcgagggcatgatggacaccatgcggccc
ggcggcaccggctatgcgatcaccccgggcgcgccgtaccagatggcgggcaagaccggc
accgcgcaggtggtcagccgcaagggcgtggcggcagtggacccgcgcagcctgccgttg
cacctgcgtcaccgcggcctgttcgtcggcttcgcgccggccgacaacccggtcatcgcg
gtggcggtggcggtggaaggcggcggtttcggcaccagttcggcggcgccgatcgcacgc
aagatcttcgatgcctggctgctgggcaagatgcccgccggtctggagccgctggacagc
gagctgggcatgaccgccgtgggcgtcaatcagttcgaagccggcgtcaccgacgcgcgc
gccgccggcgacgccgccgctgccacgctggacgagctgccggtggtgatcggccagagc
gccgttgcgctggaccccaacactcccgcgcaaccggtggtgccggatgtgccggacgcg
gtgcaggagaccgaccattga
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