Xanthomonas perforans: BJD13_17220
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Entry
BJD13_17220 CDS
T04778
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BJD13_17220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_17220
Enzymes [BR:
xpe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BJD13_17220
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BJD13_17220
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
AAA_22
NAT10_TcmA_helicase
UvrD_C
DEAD
T2SSE
AAA_16
nSTAND3
SLFN-g3_helicase
AAA_28
Rad17
Motif
Other DBs
NCBI-ProteinID:
APP00595
UniProt:
A0A0G8WMT0
LinkDB
All DBs
Position
3454053..3456428
Genome browser
AA seq
791 aa
AA seq
DB search
MTHPNLLAALNQSGALRTLDLAFAQSLQRLEPDTDPRVLAGAALASLAVTSGHAGLDPAR
AAMLLDARDGPAPTFPDPADWQRSLAASRWVDQPQPDAPAAADCPLVLERGLLYLRRYRE
YERRLALGLQRIAAQPLPPVDAATLAPLFAQLFPNAIPTPRTAEPTPLPPGEGARRAGEG
TGLPAPIHYQEGTTPPTPSHPPDRQAQAAALALRRALLLVTGGPGTGKTTTIARLLLLRI
AQARASSTPAPRIALAAPTGRAAERMAESLRAAIARAIADGIQLPAAGSLPAPSGSAGLI
TSTHPTNAAAPASTGAGLELQTHAASEQGGPPSWEALLPSGASTLHRLLGVIPDSPHFHH
NADNPLPFDLIVVDEASMVDLPLMCKLVDAVADGTQLILLGDADQLPSVEAGDVLAAILQ
AAGPGDALQPEDAQALQSLLGSAPVERPPAVTSATRSGGLDGHRVHLLRGYRQAQDFALA
PLADAIRAGDADTALALLRSGELPGVHFHEDGEDPLALGRDALLAHWRALANAQDPAAAL
RDAGRLRLLTAVRAGPQGARGLNARIEQLLADTGSGARRLGGASPWFQGRLLLITENSYR
HGLFNGDVGICLRSDAGPSPGQGDASAVTARGHAAPSSRPGHAGDSARHDAPATDRRAQG
PLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEFDEVWLQLPTRDARVLSREL
LYTGITRARRALHLAASEAVMRAALARHAARISGLAWRLGAKDDKPPPVPAPTPAPLPQP
PPSAPVQGALF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgacccatccaaacctgctcgctgccctcaaccagagcggcgccctgcgcaccctggat
ctggccttcgcgcaaagcctgcaacgcctggagccggacaccgacccacgggtgctggcc
ggcgccgcgctcgcctcgctggcggtcaccagcggccacgccggcctggaccccgcccgc
gccgccatgttgctggacgcgcgcgatggcccggcgcccaccttcccggaccccgccgac
tggcaacgcagcctggctgcctcgcgctgggtcgaccaaccgcagcccgacgccccggcc
gccgccgattgcccgctcgtcctcgaacgcggcctgctctacctgcgccgctaccgcgag
tacgaacgccgcctggccctgggcctgcaacgcatcgccgcgcaaccgctgccgccggtc
gacgccgccacgctggcgccgctgttcgcgcagttgttcccgaacgcgatcccaacccct
cgtaccgcggagccaaccccgcttcccccgggagagggtgcccgacgggcgggtgagggt
acgggcctgcccgcgccaatccactaccaagagggaacaaccccccccacgccatcccac
cccccggaccgccaggcccaggccgccgcactcgcgctacgccgcgcgttactgctggtc
accggcggcccgggcaccggcaagaccaccaccatcgcccgcctgctgttgctgcgcatc
gcccaggcacgggcatccagcacgccggccccacgcatcgccctggccgcgcccaccggc
cgcgccgccgagcgcatggccgaaagcctgcgcgccgccatcgcgcgtgccatcgccgac
ggcatccagctcccggccgccggctcgctccccgcaccatcgggaagcgccggcctcatc
acgtccacgcatccgaccaatgccgccgcgcccgcgtccaccggcgccggattggaactg
cagacgcatgccgcctcagagcagggcgggccgcccagctgggaagcgctgctgcccagc
ggcgccagtaccctgcatcgtctgctcggcgtcatcccggattccccgcacttccaccac
aacgccgacaacccgctgccgttcgacctgatcgtcgtcgacgaagcctccatggtcgac
ctgccgctgatgtgcaaactggtcgacgccgtcgccgatggcacccagctgatcctgctt
ggcgatgccgaccagctgccttcggtggaagccggcgacgtgctggccgccatcctgcag
gccgccggcccgggcgatgccctgcagcccgaagacgcccaggcactgcaatcgctgctc
ggcagcgcgcccgtcgagcgtccgcctgcggtcacctccgccacccgcagcggcggcctg
gacggccaccgcgtgcacctgctgcgcggctatcgccaggcgcaggatttcgcactggcg
ccactggccgacgccatccgcgccggcgatgccgacaccgccctggccctgctgcgcagc
ggcgaactgcccggcgtgcacttccacgaagacggcgaagatccgctggcactcggccgc
gacgcgctgctcgcgcactggcgcgcgctggccaacgcccaggaccccgccgccgccctg
cgcgatgccggccgcctgcgcctgctcaccgcggtgcgtgccggcccgcaaggcgcacgc
ggcctcaacgcccgcatcgaacaactgctcgccgacaccggctccggcgcccgccgtctg
ggcggcgcctcgccctggttccagggccgcctgctgctgatcaccgaaaacagctatcgc
cacggcctgttcaatggcgatgtcggtatctgcctgcgcagcgacgcgggcccttccccc
gggcagggcgacgcaagtgccgtgaccgcgcgcggccacgcggcaccgtcgtcaaggccg
ggccacgctggcgacagcgcacgccatgacgcccccgccaccgaccgccgtgcccaaggc
cccttggtcgcctggttcgaaggcgacggcgacggccaggtgcgcggcttccaccccgcc
gcactgcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcccagggcagcgaa
ttcgacgaggtctggctgcaactgcccacccgcgacgcccgcgtactcagccgcgaactg
ctctacaccggcatcacccgcgcccgccgcgccctgcacctggccgccagcgaagcggtc
atgcgcgccgcactggcacgccacgccgcgcggatctcgggcttggcgtggcggttgggt
gcaaaagacgacaagccaccgccggttccagcacccactccagcgccacttccacaacca
ccgcctagtgcacctgtgcaaggtgcgctgttctga
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