Xanthomonas perforans: BJD13_17950
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Entry
BJD13_17950 CDS
T04778
Name
(GenBank) type IV secretion protein Rhs
Organism
xpe
Xanthomonas perforans
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
A_amylase_inhib
Motif
Other DBs
NCBI-ProteinID:
APP02004
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Position
3634438..3636774
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AA seq
778 aa
AA seq
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MTYNSNAQPISITAFGKLRQTIGYNSDGTVAYVADANNNSTTLGSWKRGVPQSVRFADGT
SISANVNDNGWISSVTDQNGYQTNYSYDQMGRLSTIAYPANDSTAWNIKSQSFERVGNAE
YDIAADHWRQTVINGNARKITYFDAMLQPLLTREYDVANESGTQRFQRLSYDTMGQLTFS
SYPGNNSSLSTGYRNSYDVLGRSISSSQDSELGSLTTTTNYLSGNQTSVTDPRGQVTVTG
YQVFDQPAYDTPVWIQHPEGTYTDIARNIFGKPISITRRNANASQALTRTYAYNSNQELC
RSVEPETGATLMGYDAAGNMKWSAAGLASDIGCDQTGASATIATRRVDRAYDSRNRLNAL
FFPDGNGNQRWTYWPDGLVKQITTINSGVASYNSYAYNKRRLLVGESQGQADGETWAINS
IYNANGDLAMHRYPTGMTVDYAPNALGQATQAGGYATGASYYPNGALRQFTYGNGIVHSM
VQNARQLPDTSEDAFGGTAVLSDGYDYDANGNVAAITDGASGRNQRGNRTMTYDGLDRLR
STVSPMFGTAEYRYDSLDNLTYVRAPGREHYYCYDPYWHLTNIKINECSGSTVVGLAYDL
QGNLTNKNGQAYVFDFGNRLRAATNKESYRYDGNGRRTQAIQSGGSVGSMYDQAGVLRFQ
KNQRLSRMTEYVLLGGSNVAEVEWTFGQVPAMKDALTWAATSGSVRYVVEESIDGLTWTS
VYEGDQTTWTSLSRPSGAYSYRVLACTQDGTCTALPGVSHVKRSAADIIPLLYQLLLN
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
attacttataatagtaatgcccagccaatctccatcacggctttcggaaagctaagacaa
accattggttataacagtgatgggacagttgcttatgttgccgacgcgaataataactcg
actacgcttggctcctggaagagaggcgtgccgcaatctgttcgttttgcggacgggacc
tcaatttctgcaaatgtcaacgacaatggctggattagttccgtaacggatcagaatggt
tatcaaacgaactatagttatgatcagatgggccgtctctcaacaattgcgtatcctgcg
aatgacagcacggcttggaatataaagtcgcaatcttttgagagagtcggcaatgctgaa
tacgatattgcggcagatcattggcgccaaacagtgatcaacggaaacgctcgtaagatt
acgtactttgatgcaatgttgcagccgcttctgacgcgcgaatatgacgtagcaaatgaa
tccgggacacagagattccagcgcctttcctacgacaccatgggtcaactaacattctct
tcctatccgggaaataacagctcgctgagtacaggttatcgaaacagttatgacgttcta
ggccgatcgatttcttcttctcaagattcagagctcggctcattaaccacgaccacgaac
tatctgtcaggaaatcaaactagcgttactgacccgcgtgggcaggtcaccgtgactggc
tatcaggtattcgaccaacccgcgtatgacacgcctgtctggatccaacatccagaaggc
acctacactgatatagctagaaatattttcggcaagccaatatcgataacccgccgcaac
gccaatgcttcccaggcgttgactcgtacttatgcttacaacagcaatcaggagctttgt
cgttcggtggagcctgaaacgggtgctactttgatgggatacgacgctgccggaaacatg
aagtggtcagctgcaggcttggcctcggatatcgggtgtgatcagactggcgcaagtgcg
acaatcgcaacgcgtcgcgtggatcgagcttatgattcgcgcaaccgtttaaatgcattg
ttcttccctgatggcaacggaaaccagcgctggacgtactggccggatggtttagtcaag
caaataactacgatcaacagcggtgtagccagttacaacagctatgcctataacaagcgt
cgtcttcttgttggcgagagtcaagggcaagcagatggagaaacctgggcgatcaactcc
atctacaacgcgaacggtgacttggcgatgcatcgttatccaactgggatgacggtcgac
tacgcgccaaacgcgctgggccaagccacgcaagccggcggctacgcgacgggcgccagt
tattatccgaacggagcgctcaggcagtttacatatggaaatggcattgtgcacagcatg
gtgcaaaacgcacgccagctgcctgacaccagtgaagatgccttcggtggcactgcagta
ttaagcgatggttatgactatgacgcaaacggtaatgttgcggccataacagacggggca
agcggtcgcaatcagcgcggcaaccgaacgatgacgtatgacgggctagatcgtttgaga
tctacggtatctccaatgtttggcaccgcggagtaccgctacgactccctggataatctg
acctacgtaagagcaccaggacgggagcattactactgttacgatccgtattggcatctt
accaatatcaagatcaatgagtgctcaggaagcaccgtcgtcggtctcgcttacgatttg
cagggcaatctcaccaacaagaatgggcaggcgtacgtcttcgacttcgggaatcgtctg
cgtgcagcaacaaataaggaaagctaccggtacgacggtaacggcaggcgaacccaagcg
atacagtcgggcggcagcgttgggtcgatgtatgaccaggctggagttttgcgctttcag
aaaaatcaacgcctttccagaatgacggagtatgttttgctgggcggcagcaacgttgcg
gaagttgagtggacgtttggacaagtacctgcaatgaaggacgctttgacctgggccgcc
acttctggaagcgtgcgctatgtggtcgaggaaagtatcgacggactgacgtggacgtcc
gtttacgaaggtgatcaaaccacgtggacctcattgtcccgcccctctggagcctattct
tatcgtgtacttgcctgtacacaggacgggacatgcacagcgctgccgggggtttcgcat
gtcaagcgttctgccgcagatatcattccgctgctctatcagcttttgctgaactga
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