Xanthomonas perforans: BJD13_18275
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Entry
BJD13_18275 CDS
T04778
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03420
Nucleotide excision repair
xpe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BJD13_18275
03430 Mismatch repair
BJD13_18275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_18275
Enzymes [BR:
xpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BJD13_18275
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD13_18275
MMR (mismatch excision repair)
Other MMR factors
BJD13_18275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
APP00766
UniProt:
A0A0G9EKC5
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All DBs
Position
3703758..3705944
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQALELDESKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARASALSLWEAAMLCTQQNTLAARARNALASFLSLIGQLHAETGQMELAE
RIDHVLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLNEVRPKVQVSRTAS
LGAARGGPVHGIVETAPIKLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttctgcg
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgcccaaccacggcatcttcgcggtg
accttcaccaacaaggcggccggcgaaatgcgtcaccgcaccgacctgcagctgcgcaat
ggcagccgcgggatgtggatcggtacatttcacgggctggcccatcgcctgttgcgtctg
cattggcaggacgcgcggttgccggaaggcttccaggtcatggacagcgacgaccagttg
cggttggtcaagcgcgtggtgcaggcgctggagctggacgagagcaagtatccgcccaag
cagatgagctggtggatcaacgagcagaaggatgagggccgccgtccgcagcatatccag
cccgagcccaacgacgattggaccgaagtgcgccggcaggtgtatgcggcttatcaggaa
cgctgcgaccgttccgggctgctggatttcgccgagttgctgctgcgcgcgcacgaattg
ctgcgcgacaccccggccttgctggcgcattaccgtgcgcgcttccgcgagattctggtc
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggcgaa
tcgggcaatgtattcgtggtgggtgacgacgaccaggccatctacggctggcgcggtgcc
aaggtcgagaatgtccagcgttttctcaaagatttccccggcgcgcagaccgtgcggctg
gagcagaactaccgctccagcgccaatatcctgggcgcggccaatgcggtgatcgcgcac
aatccggaccgcatcggcaagcagctgtggaccgattccggcgatggcgacccgatcgat
ctgtatgcggcctacaacgaagtggacgaggcgcgttatgtggtcgagcgtgcacggcag
tgggtgcgcgacggcggcagttatggcgaagtggcggtgctctaccgcagcaatgcgcaa
tcgcgcgcgctggaagaagcgctgatttccgagcagttgccgtaccgcgtgtatggcggt
atgcgcttcttcgaacgtgccgaaatcaaggacgcgttggcttatttgcgcctgctcacc
aaccgcagcgacgacgcggccttcgaacgcgcggtcaacacgcccacgcgtggcattggc
gaccggacgctggatgaggtgcgccggctggcgcgtgccagtgcgctgtcgttgtgggaa
gcggccatgttgtgcacgcagcagaacacgctggccgcacgcgcacgcaatgccctggcc
agcttcctcagcctgatcggccagctgcatgccgaaaccggacagatggaactggccgaa
cgcatcgaccatgtgctgatgcgctcgggtctgcgcgagcattgggccaaggaaagccgt
ggcgggctggattcggaatcgcgtaccgagaacctggacgaactggtgtcggtcgcctcg
cgcttcacccgccccgatgacgaagacagccagggcatgaccgagctggtcgccttcctg
gcctatgcctcgctggaggccggcgaaggccaggcccaggctggcgaggaaggcgtgcag
ctgatgacgctgcattcggccaagggcctggagttccccatcgtgttcctggtcggtctg
gaagacggcctgttccccagcgcgcgctcgttggaagagagcgggcggctggaagaggag
cgtcgcctggcgtacgtgggcatcacccgcgcgcggcagaagctggtgctgtgctacgcc
gaatcacgccgcatccacggccaggacaactacaacgtgccctcgcgcttcctgcgcgag
attccgcgcgacctgctcaacgaagtacgccccaaggtgcaggtttcgcgcactgcatcg
ctgggcgcggcgcgcggcggcccggtgcatggcatcgtggagaccgcgccgatcaagctc
ggcgccaatgtcgaacaccccaagttcggcggcggcgtggtagtcgattacgaaggcgct
ggcgcgcatgcgcgcgtgcaggtgcagttcgatgaggtcggcgccaagtggctggtgatg
gcctacgccaatctgactgtggtgtag
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