Xanthomonas perforans: BJD13_18500
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Entry
BJD13_18500 CDS
T04778
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xpe
Xanthomonas perforans
Pathway
xpe03030
DNA replication
xpe03410
Base excision repair
xpe03420
Nucleotide excision repair
xpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BJD13_18500
03410 Base excision repair
BJD13_18500
03420 Nucleotide excision repair
BJD13_18500
03440 Homologous recombination
BJD13_18500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xpe03032
]
BJD13_18500
03400 DNA repair and recombination proteins [BR:
xpe03400
]
BJD13_18500
Enzymes [BR:
xpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BJD13_18500
DNA replication proteins [BR:
xpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BJD13_18500
DNA repair and recombination proteins [BR:
xpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BJD13_18500
NER (nucleotide excision repair)
GGR (global genome repair) factors
BJD13_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
APP00804
LinkDB
All DBs
Position
3767352..3770153
Genome browser
AA seq
933 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYIAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQGA
ADGLQVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYDSLDGVIANADKIKGKIGDNLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNAEALAVLYARYGFTQALRELGGAAAQAGLLAEPVALGAAAA
TARTEPGRARGTGFVSGPVNAAVDLDPSLSAPGQYETILTQEQLDSWIARLRAAGQFAFD
TETDSLDPLQADLIGLSVAAEPGQAAYLPFGHHFPGAPAQLDRTQALAQLAPLLTDPAVR
KLGQHGKYDLHVMRRHGVALAGYADDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYED
VCGKGAKQIPFAQISLEDATRYAAEDADITLRLHRVLGPRLASEPGLERVYRDIEMPLVD
VLARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRSFNLDSPKQLQALLFDELK
LPAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLAKLRSTYTDKLPEMIHPQSGRV
HTSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMA
HLSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLAR
QLGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQ
RAGAERAAINAPMQGTAADIIKRAMVNVDGWIANHAQRAKMILQVHDELVFEADIDFVDT
LLSEVTTRMAGAAELRVPLMVDSGVGDNWDQAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtatcgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggtgccttgttcggcgtggtcaacatg
ttgcgcgccaccttgaaggagcgcccggcctacatcgccttcgtggtggatgcgcccggt
aaaacgttccgtgatgacttgtatgccgactacaaggccaaccgaccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgatggcgtggaagcggacgatgtgatcggcacgctggcgctgcagggcgcc
gccgatggcttgcaggtcaccatctccaccggcgacaaggacttcgcccagctggtgcgt
ccgggcatcgaactggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcggcccgatcagatcgtcgacctgctggcgttgatgggcgac
accgtcgacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgactcgctcgatggcgtcatcgccaacgccgacaagatcaagggcaagatc
ggcgacaacctgcgcgccgcattgccacgcctgccgctcaaccgtgagctggtgaccatc
aagaccgatgtcaccctggccagcggcccgcgcgcgctggacctgcgcgagcccaacgcc
gaggcgctggcggtgctgtacgcccgctacggcttcacccaggcgctgcgcgaactcggt
ggtgcggccgcccaggcgggcctgctggccgagccggtggcgctgggcgctgctgctgcc
actgcgcgcaccgaaccgggccgcgcgcgcggcaccggcttcgtctccggccccgtcaac
gccgcggtggatctcgatccgtcgctgtcggcgcccggccagtacgagaccatcctgacc
caggagcagctcgacagctggatcgcgcggctgcgtgccgccgggcagttcgccttcgat
accgaaaccgacagcctggacccgctgcaggccgatttgatcggcctgagcgtggcggcc
gagcccggccaggcggcgtacctgccgtttggccatcacttccccggtgcgccggctcaa
ctcgaccgtacccaggcattggcgcaactggcgccactgctcaccgacccggccgtgcgc
aagctcggccagcacggcaagtacgacctgcacgtgatgcgccggcatggcgtggcgctg
gccggctatgccgacgacaccctgctggagagcttcgtgctcaattccggcagtgcccgc
cacgacatggacagcctggccaagcgctatctcggctacgacaccgtcaagtacgaagac
gtctgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaagacgccacc
cgctacgccgccgaggacgccgacatcaccttgcgcctgcatcgcgtgctcggcccccgg
ctggccagcgaaccgggcctggagcgcgtctaccgcgacatcgaaatgccgctggtggac
gtgctggcccgcatcgaagccaacggtgtgtgcgtggatgcggccgaactgcgccgccag
agtgcggacctgtccaagcgcatgctcgctgcccagcagaaagccaccgagcttgccggg
cgcagcttcaacctggattcgcccaagcagctgcaggctttgctgttcgacgagctcaag
ctccccgccgtggtcaagacgcccaagggccagccctcgaccaacgaagaagcactggaa
gccatcgccgaccagcacgagctgccgcgggtcatcctggaataccgtggcctggccaag
ctgcgcagcacctacaccgacaagctgccggagatgatccacccgcagtccgggcgcgtg
cacaccagctaccaccaggccggcgccgccaccgggcggctgtcctcgtccgatccgaac
ctgcagaacatcccgatccgcaccgaagacggtcgtcgcatccgccgcgcgttcgtcgcc
ccggccggacgcaagctgatcgcctgcgactattcgcagatcgagctgcgcatcatggcg
cacctgtccggcgaccccggactggtgggcgcgttcgaatccggcgccgacgtccaccgc
gccaccgccgccgaagtgttcggccgcaccatcgacaccgtcagcggcgatgagcgccgc
gccgccaaggccatcaacttcggcctgatgtacggcatgagcgccttcggcctggcccgt
cagctcggtatcggccgcggcgaggcgcaggactacatcgcgctgtacttcagccgttac
ccgggcgtgcgcgacttcatggaaaccacccgccagcaggcgcgcgacaagggctacgtg
gaaacggtgttcgggcgccggctgtatctggacttcatcaatgccggcagccagggccag
cgtgccggtgccgagcgcgccgccatcaacgcgccgatgcagggcaccgccgcagatatc
atcaagcgcgccatggtcaacgtggacggctggatcgccaaccacgcgcaacgcgcgaag
atgatcttgcaggtgcacgacgaactggtgttcgaagccgatatcgatttcgtcgatacg
ctactgagcgaggtcaccacgcgcatggcgggcgcagctgaattacgcgtgccgttgatg
gtggattcgggcgttggcgataattgggaccaggcgcattga
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